Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AL583832.1-201ENST00000603227 784 ntBASIC5.52□□□□□ -1.53
EFNB3Q15768 AL359704.2-201ENST00000604335 521 ntBASIC5.52□□□□□ -1.53
EFNB3Q15768 BNIP3P19-201ENST00000605397 577 ntBASIC5.52□□□□□ -1.53
EFNB3Q15768 uc_338.31-201ENST00000615595 186 ntBASIC5.52□□□□□ -1.53
EFNB3Q15768 AL359742.1-201ENST00000622497 540 ntBASIC5.52□□□□□ -1.53
EFNB3Q15768 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.52□□□□□ -1.53
EFNB3Q15768 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
EFNB3Q15768 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.52□□□□□ -1.53
EFNB3Q15768 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EFNB3Q15768 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.52□□□□□ -1.53
EFNB3Q15768 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
EFNB3Q15768 WBP11P1-201ENST00000562560 1931 ntBASIC5.52□□□□□ -1.53
EFNB3Q15768 AP003486.1-201ENST00000525716 3994 ntBASIC5.52□□□□□ -1.53
EFNB3Q15768 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.52□□□□□ -1.53
EFNB3Q15768 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
EFNB3Q15768 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
EFNB3Q15768 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EFNB3Q15768 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.52□□□□□ -1.53
EFNB3Q15768 AL391261.1-201ENST00000555712 1479 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
EFNB3Q15768 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.51□□□□□ -1.53
EFNB3Q15768 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
EFNB3Q15768 ZNF658B-201ENST00000602828 3408 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.51□□□□□ -1.53
EFNB3Q15768 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.51□□□□□ -1.53
EFNB3Q15768 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.51□□□□□ -1.53
EFNB3Q15768 AKAP17BP-201ENST00000431706 2719 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.51□□□□□ -1.53
EFNB3Q15768 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
EFNB3Q15768 CDY11P-201ENST00000447168 1651 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
EFNB3Q15768 AC011455.2-201ENST00000599320 3336 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
EFNB3Q15768 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
EFNB3Q15768 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
EFNB3Q15768 RPL11P4-201ENST00000332269 436 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 SNORD16-201ENST00000362803 99 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 RNU1-65P-201ENST00000363919 148 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 RN7SKP237-201ENST00000364663 301 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 CXADRP1-201ENST00000398098 1095 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 AL023284.3-201ENST00000407767 334 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.51□□□□□ -1.53
EFNB3Q15768 AC098592.2-201ENST00000413158 265 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.51□□□□□ -1.53
EFNB3Q15768 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.51□□□□□ -1.53
EFNB3Q15768 OSTCP4-201ENST00000424397 449 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.51□□□□□ -1.53
EFNB3Q15768 UBE2V1P6-201ENST00000430840 422 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.51□□□□□ -1.53
EFNB3Q15768 AL158053.1-201ENST00000441503 453 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 POU5F1P5-201ENST00000445059 658 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 GXYLT1P1-201ENST00000446657 490 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EFNB3Q15768 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.51□□□□□ -1.53
EFNB3Q15768 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.51□□□□□ -1.53
EFNB3Q15768 CCNJP2-201ENST00000457810 1163 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
EFNB3Q15768 RN7SL643P-201ENST00000471845 291 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.51□□□□□ -1.53
EFNB3Q15768 AC016687.1-201ENST00000482574 353 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.51□□□□□ -1.53
EFNB3Q15768 AC018797.1-201ENST00000510791 255 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.51□□□□□ -1.53
EFNB3Q15768 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.51□□□□□ -1.53
EFNB3Q15768 AC009729.1-201ENST00000548873 1133 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 AC026826.3-201ENST00000561747 158 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 AC005632.2-201ENST00000564271 828 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.51□□□□□ -1.53
EFNB3Q15768 OR1E3-201ENST00000575608 948 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.51□□□□□ -1.53
EFNB3Q15768 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.51□□□□□ -1.53
EFNB3Q15768 BNIP3P39-201ENST00000601077 554 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 AL078623.1-201ENST00000602702 907 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.51□□□□□ -1.53
EFNB3Q15768 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.51□□□□□ -1.53
EFNB3Q15768 AL135999.3-201ENST00000610501 812 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 CXADRP3-202ENST00000617265 1100 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
EFNB3Q15768 AC073593.1-201ENST00000624500 411 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 AP001052.1-201ENST00000626421 99 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.51□□□□□ -1.53
EFNB3Q15768 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.51□□□□□ -1.53
EFNB3Q15768 AL592494.2-201ENST00000425455 1548 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
EFNB3Q15768 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
EFNB3Q15768 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.51□□□□□ -1.53
EFNB3Q15768 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
EFNB3Q15768 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.51□□□□□ -1.53
EFNB3Q15768 CASC19-246ENST00000641625 1606 ntBASIC5.51□□□□□ -1.53
EFNB3Q15768 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EFNB3Q15768 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.51□□□□□ -1.53
EFNB3Q15768 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EFNB3Q15768 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
EFNB3Q15768 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EFNB3Q15768 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
EFNB3Q15768 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
EFNB3Q15768 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
EFNB3Q15768 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms