Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC022726.2-201ENST00000634673 547 ntBASIC5.56□□□□□ -1.52
CLDN18P56856 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN18P56856 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN18P56856 BRAFP1-201ENST00000445336 2703 ntBASIC5.56□□□□□ -1.52
CLDN18P56856 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN18P56856 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN18P56856 AL391261.1-201ENST00000555712 1479 ntBASIC5.56□□□□□ -1.52
CLDN18P56856 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN18P56856 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN18P56856 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN18P56856 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CLDN18P56856 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN18P56856 AL354854.1-201ENST00000455940 1363 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CLDN18P56856 AC083837.1-201ENST00000565297 2994 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CLDN18P56856 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CLDN18P56856 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CLDN18P56856 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN18P56856 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.55□□□□□ -1.52
CLDN18P56856 AC011815.2-201ENST00000618230 2021 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CLDN18P56856 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.55□□□□□ -1.52
CLDN18P56856 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
CLDN18P56856 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN18P56856 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CLDN18P56856 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CLDN18P56856 RN7SKP275-201ENST00000364626 301 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 RNA5SP156-201ENST00000410250 110 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN18P56856 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN18P56856 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.55□□□□□ -1.52
CLDN18P56856 AL353662.1-201ENST00000439099 327 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.55□□□□□ -1.52
CLDN18P56856 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.55□□□□□ -1.52
CLDN18P56856 PRMT5P1-201ENST00000514351 598 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 RNA5SP400-201ENST00000517155 111 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 AC021269.1-201ENST00000526860 705 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 AP005639.1-201ENST00000526939 192 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.55□□□□□ -1.52
CLDN18P56856 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.55□□□□□ -1.52
CLDN18P56856 CYCSP38-201ENST00000559840 322 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 AC067852.5-201ENST00000589299 310 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 AC107993.1-201ENST00000591343 684 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN18P56856 AC091193.1-201ENST00000604640 448 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 AL683813.2-201ENST00000605245 502 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 AC004801.6-201ENST00000616571 978 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.55□□□□□ -1.52
CLDN18P56856 AP000550.3-201ENST00000637734 379 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 OR7A1P-202ENST00000641542 1158 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN18P56856 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN18P56856 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN18P56856 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.55□□□□□ -1.52
CLDN18P56856 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN18P56856 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.55□□□□□ -1.52
CLDN18P56856 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN18P56856 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.55□□□□□ -1.52
CLDN18P56856 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN18P56856 AC093225.1-201ENST00000506867 1408 ntBASIC5.55□□□□□ -1.52
CLDN18P56856 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN18P56856 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN18P56856 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN18P56856 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN18P56856 AP001541.1-201ENST00000623322 1904 ntBASIC5.54□□□□□ -1.52
CLDN18P56856 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN18P56856 AC018628.1-201ENST00000624147 3819 ntBASIC5.54□□□□□ -1.52
CLDN18P56856 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN18P56856 LYARP1-201ENST00000436977 1501 ntBASIC5.54□□□□□ -1.52
CLDN18P56856 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN18P56856 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN18P56856 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN18P56856 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CLDN18P56856 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN18P56856 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN18P56856 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN18P56856 RNU1-134P-201ENST00000362935 165 ntBASIC5.54□□□□□ -1.52
CLDN18P56856 AL451142.1-201ENST00000375867 775 ntBASIC5.54□□□□□ -1.52
CLDN18P56856 MIR130B-202ENST00000385018 82 ntBASIC5.54□□□□□ -1.52
CLDN18P56856 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN18P56856 AC115283.1-201ENST00000427353 400 ntBASIC5.54□□□□□ -1.52
CLDN18P56856 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN18P56856 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN18P56856 HMGN1P2-201ENST00000445197 310 ntBASIC5.54□□□□□ -1.52
CLDN18P56856 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN18P56856 PPIAP27-201ENST00000453800 265 ntBASIC5.54□□□□□ -1.52
CLDN18P56856 LSM3P4-201ENST00000502948 309 ntBASIC5.54□□□□□ -1.52
CLDN18P56856 AL158068.1-201ENST00000506116 616 ntBASIC5.54□□□□□ -1.52
CLDN18P56856 LDHAP1-201ENST00000509421 992 ntBASIC5.54□□□□□ -1.52
CLDN18P56856 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN18P56856 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.54□□□□□ -1.52
CLDN18P56856 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN18P56856 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN18P56856 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN18P56856 AC008507.3-201ENST00000585753 472 ntBASIC5.54□□□□□ -1.52
CLDN18P56856 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN18P56856 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN18P56856 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms