Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
LIMK2P53671 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK2P53671 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK2P53671 AC104966.1-201ENST00000467010 1464 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
LIMK2P53671 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
LIMK2P53671 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.41
LIMK2P53671 AC114876.1-201ENST00000490962 1366 ntBASIC6.21□□□□□ -1.41
LIMK2P53671 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
LIMK2P53671 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
LIMK2P53671 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.21□□□□□ -1.42
LIMK2P53671 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
LIMK2P53671 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK2P53671 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
LIMK2P53671 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.21□□□□□ -1.42
LIMK2P53671 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK2P53671 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.21□□□□□ -1.42
LIMK2P53671 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.21□□□□□ -1.42
LIMK2P53671 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.21□□□□□ -1.42
LIMK2P53671 AC016724.1-201ENST00000453215 421 ntBASIC6.21□□□□□ -1.42
LIMK2P53671 AC073594.1-201ENST00000462065 364 ntBASIC6.21□□□□□ -1.42
LIMK2P53671 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.21□□□□□ -1.42
LIMK2P53671 SNX18P25-201ENST00000510539 758 ntBASIC6.21□□□□□ -1.42
LIMK2P53671 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.21□□□□□ -1.42
LIMK2P53671 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK2P53671 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.21□□□□□ -1.42
LIMK2P53671 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK2P53671 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.21□□□□□ -1.42
LIMK2P53671 AC005726.4-201ENST00000582858 458 ntBASIC6.21□□□□□ -1.42
LIMK2P53671 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.21□□□□□ -1.42
LIMK2P53671 AC020916.2-201ENST00000591242 360 ntBASIC6.21□□□□□ -1.42
LIMK2P53671 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.21□□□□□ -1.42
LIMK2P53671 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.21□□□□□ -1.42
LIMK2P53671 AC004890.3-201ENST00000605566 1095 ntBASIC6.21□□□□□ -1.42
LIMK2P53671 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.21□□□□□ -1.42
LIMK2P53671 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK2P53671 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
LIMK2P53671 AL359091.1-201ENST00000449048 1734 ntBASIC6.21□□□□□ -1.42
LIMK2P53671 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
LIMK2P53671 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK2P53671 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK2P53671 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
LIMK2P53671 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
LIMK2P53671 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LIMK2P53671 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LIMK2P53671 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
LIMK2P53671 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
LIMK2P53671 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK2P53671 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LIMK2P53671 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.2□□□□□ -1.42
LIMK2P53671 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.2□□□□□ -1.42
LIMK2P53671 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 SNORA43.1-201ENST00000364863 140 ntBASIC6.2□□□□□ -1.42
LIMK2P53671 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.2□□□□□ -1.42
LIMK2P53671 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.2□□□□□ -1.42
LIMK2P53671 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK2P53671 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 CXCR2P1-202ENST00000443392 1074 ntBASIC6.2□□□□□ -1.42
LIMK2P53671 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK2P53671 OR52I1-201ENST00000450052 1050 ntBASIC6.2□□□□□ -1.42
LIMK2P53671 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.2□□□□□ -1.42
LIMK2P53671 RN7SL326P-201ENST00000477493 296 ntBASIC6.2□□□□□ -1.42
LIMK2P53671 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.2□□□□□ -1.42
LIMK2P53671 NATP-201ENST00000523491 878 ntBASIC6.2□□□□□ -1.42
LIMK2P53671 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK2P53671 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.2□□□□□ -1.42
LIMK2P53671 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.2□□□□□ -1.42
LIMK2P53671 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.2□□□□□ -1.42
LIMK2P53671 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK2P53671 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.2□□□□□ -1.42
LIMK2P53671 RPSAP75-201ENST00000605848 301 ntBASIC6.2□□□□□ -1.42
LIMK2P53671 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.2□□□□□ -1.42
LIMK2P53671 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.2□□□□□ -1.42
LIMK2P53671 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LIMK2P53671 AL359976.1-201ENST00000418655 3528 ntBASIC6.2□□□□□ -1.42
LIMK2P53671 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LIMK2P53671 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.2□□□□□ -1.42
LIMK2P53671 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.2□□□□□ -1.42
LIMK2P53671 AL731532.1-201ENST00000623972 4236 ntBASIC6.2□□□□□ -1.42
LIMK2P53671 AC007159.1-201ENST00000566529 4706 ntBASIC6.2□□□□□ -1.42
LIMK2P53671 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
LIMK2P53671 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK2P53671 AC092724.1-201ENST00000624623 3397 ntBASIC6.2□□□□□ -1.42
LIMK2P53671 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms