Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC105235.1-201ENST00000623208 1816 ntBASIC5.89□□□□□ -1.47
CENPAP49450 AC026523.2-201ENST00000625039 7739 ntBASIC5.89□□□□□ -1.47
CENPAP49450 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CENPAP49450 AC093844.1-201ENST00000514910 1361 ntBASIC5.89□□□□□ -1.47
CENPAP49450 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CENPAP49450 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.89□□□□□ -1.47
CENPAP49450 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CENPAP49450 MKI67P1-201ENST00000604297 1460 ntBASIC5.89□□□□□ -1.47
CENPAP49450 AL161756.3-201ENST00000641216 2071 ntBASIC5.89□□□□□ -1.47
CENPAP49450 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CENPAP49450 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CENPAP49450 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CENPAP49450 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.89□□□□□ -1.47
CENPAP49450 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
CENPAP49450 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.88□□□□□ -1.47
CENPAP49450 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CENPAP49450 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 AC133552.1-201ENST00000569988 4007 ntBASIC5.88□□□□□ -1.47
CENPAP49450 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.88□□□□□ -1.47
CENPAP49450 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.88□□□□□ -1.47
CENPAP49450 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.88□□□□□ -1.47
CENPAP49450 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.88□□□□□ -1.47
CENPAP49450 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.88□□□□□ -1.47
CENPAP49450 AL359092.1-201ENST00000417156 265 ntBASIC5.88□□□□□ -1.47
CENPAP49450 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.88□□□□□ -1.47
CENPAP49450 AC113412.1-201ENST00000425840 504 ntBASIC5.88□□□□□ -1.47
CENPAP49450 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.88□□□□□ -1.47
CENPAP49450 AC003989.1-201ENST00000434569 565 ntBASIC5.88□□□□□ -1.47
CENPAP49450 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.88□□□□□ -1.47
CENPAP49450 RPS10P14-201ENST00000440748 502 ntBASIC5.88□□□□□ -1.47
CENPAP49450 AL929410.2-201ENST00000451170 189 ntBASIC5.88□□□□□ -1.47
CENPAP49450 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.88□□□□□ -1.47
CENPAP49450 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CENPAP49450 AC019227.1-201ENST00000526902 510 ntBASIC5.88□□□□□ -1.47
CENPAP49450 OR4R2P-201ENST00000530815 597 ntBASIC5.88□□□□□ -1.47
CENPAP49450 AC005000.1-201ENST00000536192 288 ntBASIC5.88□□□□□ -1.47
CENPAP49450 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.88□□□□□ -1.47
CENPAP49450 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.88□□□□□ -1.47
CENPAP49450 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.88□□□□□ -1.47
CENPAP49450 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.88□□□□□ -1.47
CENPAP49450 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.88□□□□□ -1.47
CENPAP49450 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.88□□□□□ -1.47
CENPAP49450 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.88□□□□□ -1.47
CENPAP49450 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.88□□□□□ -1.47
CENPAP49450 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.88□□□□□ -1.47
CENPAP49450 AL132640.3-201ENST00000630473 177 ntBASIC5.88□□□□□ -1.47
CENPAP49450 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.88□□□□□ -1.47
CENPAP49450 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.88□□□□□ -1.47
CENPAP49450 AL137141.1-201ENST00000624622 4836 ntBASIC5.88□□□□□ -1.47
CENPAP49450 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.88□□□□□ -1.47
CENPAP49450 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.88□□□□□ -1.47
CENPAP49450 OR9K1P-202ENST00000641111 3217 ntBASIC5.88□□□□□ -1.47
CENPAP49450 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CENPAP49450 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CENPAP49450 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CENPAP49450 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.88□□□□□ -1.47
CENPAP49450 AC097461.1-201ENST00000568928 2821 ntBASIC5.88□□□□□ -1.47
CENPAP49450 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
CENPAP49450 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CENPAP49450 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.87□□□□□ -1.47
CENPAP49450 AC062029.1-202ENST00000606164 3651 ntBASIC5.87□□□□□ -1.47
CENPAP49450 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CENPAP49450 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.87□□□□□ -1.47
CENPAP49450 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
CENPAP49450 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
CENPAP49450 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CENPAP49450 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CENPAP49450 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CENPAP49450 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CENPAP49450 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.87□□□□□ -1.47
CENPAP49450 RNU6-1331P-201ENST00000363658 106 ntBASIC5.87□□□□□ -1.47
CENPAP49450 SNORA27.3-201ENST00000364937 134 ntBASIC5.87□□□□□ -1.47
CENPAP49450 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.87□□□□□ -1.47
CENPAP49450 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.87□□□□□ -1.47
CENPAP49450 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CENPAP49450 AL929472.1-201ENST00000417484 429 ntBASIC5.87□□□□□ -1.47
CENPAP49450 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.87□□□□□ -1.47
CENPAP49450 AC002127.1-201ENST00000421305 225 ntBASIC5.87□□□□□ -1.47
CENPAP49450 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.87□□□□□ -1.47
CENPAP49450 MTND4LP14-201ENST00000429447 288 ntBASIC5.87□□□□□ -1.47
CENPAP49450 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.87□□□□□ -1.47
CENPAP49450 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC5.87□□□□□ -1.47
CENPAP49450 NPM1P19-201ENST00000450070 712 ntBASIC5.87□□□□□ -1.47
CENPAP49450 RPL7AP71-201ENST00000451120 739 ntBASIC5.87□□□□□ -1.47
CENPAP49450 RPL26P30-201ENST00000453533 435 ntBASIC5.87□□□□□ -1.47
CENPAP49450 RPSAP24-201ENST00000461543 873 ntBASIC5.87□□□□□ -1.47
CENPAP49450 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms