Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CYCSP52-201ENST00000422857 310 ntBASIC5.66□□□□□ -1.5
SOX2P48431 MTND4LP13-201ENST00000425022 298 ntBASIC5.66□□□□□ -1.5
SOX2P48431 RBMY2JP-201ENST00000425544 1059 ntBASIC5.66□□□□□ -1.5
SOX2P48431 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.66□□□□□ -1.5
SOX2P48431 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.66□□□□□ -1.5
SOX2P48431 MTCYBP15-201ENST00000433123 1127 ntBASIC5.66□□□□□ -1.5
SOX2P48431 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.66□□□□□ -1.5
SOX2P48431 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SOX2P48431 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.66□□□□□ -1.5
SOX2P48431 AC092421.1-201ENST00000448148 418 ntBASIC5.66□□□□□ -1.5
SOX2P48431 SNX18P26-201ENST00000458433 740 ntBASIC5.66□□□□□ -1.5
SOX2P48431 CBX5P1-201ENST00000468470 561 ntBASIC5.66□□□□□ -1.5
SOX2P48431 AC105918.1-201ENST00000474399 838 ntBASIC5.66□□□□□ -1.5
SOX2P48431 RN7SL849P-201ENST00000485236 295 ntBASIC5.66□□□□□ -1.5
SOX2P48431 AL390198.2-201ENST00000510553 222 ntBASIC5.66□□□□□ -1.5
SOX2P48431 AC093770.1-201ENST00000511559 571 ntBASIC5.66□□□□□ -1.5
SOX2P48431 RN7SKP248-201ENST00000516278 305 ntBASIC5.66□□□□□ -1.5
SOX2P48431 AP003355.1-201ENST00000518956 587 ntBASIC5.66□□□□□ -1.5
SOX2P48431 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SOX2P48431 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC5.66□□□□□ -1.5
SOX2P48431 AC008429.2-201ENST00000523057 864 ntBASIC5.66□□□□□ -1.5
SOX2P48431 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.66□□□□□ -1.5
SOX2P48431 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SOX2P48431 AL121579.2-201ENST00000555466 590 ntBASIC5.66□□□□□ -1.5
SOX2P48431 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SOX2P48431 AC084759.1-201ENST00000561168 290 ntBASIC5.66□□□□□ -1.5
SOX2P48431 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.66□□□□□ -1.5
SOX2P48431 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.66□□□□□ -1.5
SOX2P48431 OOSP1P2-201ENST00000579644 351 ntBASIC5.66□□□□□ -1.5
SOX2P48431 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.66□□□□□ -1.5
SOX2P48431 AP006587.6-201ENST00000582128 1091 ntBASIC5.66□□□□□ -1.5
SOX2P48431 MIR5682-201ENST00000584864 76 ntBASIC5.66□□□□□ -1.5
SOX2P48431 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.66□□□□□ -1.5
SOX2P48431 AL035417.2-201ENST00000603887 796 ntBASIC5.66□□□□□ -1.5
SOX2P48431 MIR8084-201ENST00000614105 89 ntBASIC5.66□□□□□ -1.5
SOX2P48431 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.66□□□□□ -1.5
SOX2P48431 AC097655.1-201ENST00000635075 318 ntBASIC5.66□□□□□ -1.5
SOX2P48431 AC004014.2-201ENST00000623718 5122 ntBASIC5.66□□□□□ -1.5
SOX2P48431 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.66□□□□□ -1.5
SOX2P48431 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SOX2P48431 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SOX2P48431 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.66□□□□□ -1.5
SOX2P48431 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SOX2P48431 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SOX2P48431 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.66□□□□□ -1.5
SOX2P48431 AC005225.5-201ENST00000623547 2225 ntBASIC5.66□□□□□ -1.5
SOX2P48431 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SOX2P48431 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SOX2P48431 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SOX2P48431 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SOX2P48431 TCP1P3-201ENST00000414406 1498 ntBASIC5.65□□□□□ -1.5
SOX2P48431 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.65□□□□□ -1.5
SOX2P48431 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SOX2P48431 BIN2P1-201ENST00000504996 1530 ntBASIC5.65□□□□□ -1.5
SOX2P48431 AC027279.1-201ENST00000568885 4284 ntBASIC5.65□□□□□ -1.5
SOX2P48431 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SOX2P48431 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SOX2P48431 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SOX2P48431 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SOX2P48431 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SOX2P48431 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SOX2P48431 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.65□□□□□ -1.5
SOX2P48431 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.65□□□□□ -1.5
SOX2P48431 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.65□□□□□ -1.5
SOX2P48431 MIR99A-201ENST00000384906 81 ntBASIC5.65□□□□□ -1.5
SOX2P48431 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SOX2P48431 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SOX2P48431 RN7SKP161-201ENST00000411110 305 ntBASIC5.65□□□□□ -1.5
SOX2P48431 RPL12P10-201ENST00000413498 498 ntBASIC5.65□□□□□ -1.5
SOX2P48431 AC106883.1-201ENST00000418805 562 ntBASIC5.65□□□□□ -1.5
SOX2P48431 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX2P48431 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SOX2P48431 MTND1P10-201ENST00000426108 832 ntBASIC5.65□□□□□ -1.5
SOX2P48431 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX2P48431 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.65□□□□□ -1.5
SOX2P48431 AC003989.1-201ENST00000434569 565 ntBASIC5.65□□□□□ -1.5
SOX2P48431 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.65□□□□□ -1.5
SOX2P48431 OSTCP2-201ENST00000437956 444 ntBASIC5.65□□□□□ -1.5
SOX2P48431 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SOX2P48431 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC5.65□□□□□ -1.5
SOX2P48431 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.65□□□□□ -1.5
SOX2P48431 RPS16P9-201ENST00000477220 427 ntBASIC5.65□□□□□ -1.5
SOX2P48431 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX2P48431 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SOX2P48431 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX2P48431 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SOX2P48431 AC067904.2-201ENST00000517322 1283 ntBASIC5.65□□□□□ -1.5
SOX2P48431 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.65□□□□□ -1.5
SOX2P48431 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.65□□□□□ -1.5
SOX2P48431 SOX5P1-201ENST00000524155 1127 ntBASIC5.65□□□□□ -1.5
SOX2P48431 OR7E13P-201ENST00000526052 910 ntBASIC5.65□□□□□ -1.5
SOX2P48431 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.65□□□□□ -1.5
SOX2P48431 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX2P48431 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX2P48431 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.65□□□□□ -1.5
SOX2P48431 AC093014.1-201ENST00000548926 724 ntBASIC5.65□□□□□ -1.5
SOX2P48431 FAM30C-201ENST00000561158 410 ntBASIC5.65□□□□□ -1.5
SOX2P48431 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX2P48431 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SOX2P48431 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms