Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.27□□□□□ -1.41
CAPN3P20807 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CAPN3P20807 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CAPN3P20807 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.27□□□□□ -1.41
CAPN3P20807 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.27□□□□□ -1.41
CAPN3P20807 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.27□□□□□ -1.41
CAPN3P20807 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.27□□□□□ -1.41
CAPN3P20807 AP005432.1-201ENST00000580891 3485 ntBASIC6.27□□□□□ -1.41
CAPN3P20807 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CAPN3P20807 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.26□□□□□ -1.41
CAPN3P20807 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 SMG1P7-201ENST00000565246 2704 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CAPN3P20807 OR5T3-201ENST00000303059 1023 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 OR11H13P-201ENST00000359695 979 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 AL359694.1-201ENST00000403247 604 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 PTPN2P1-201ENST00000423212 1072 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 AC046176.1-201ENST00000435260 1170 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 NPM1P23-201ENST00000440193 849 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.26□□□□□ -1.41
CAPN3P20807 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.26□□□□□ -1.41
CAPN3P20807 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.26□□□□□ -1.41
CAPN3P20807 VN1R48P-201ENST00000448149 1036 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 RPSAP39-201ENST00000467439 883 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.26□□□□□ -1.41
CAPN3P20807 MARK2P8-201ENST00000476069 952 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 RPL29P23-201ENST00000486188 442 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 RPL37P23-201ENST00000492641 294 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 AC091849.1-201ENST00000509920 121 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.26□□□□□ -1.41
CAPN3P20807 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.26□□□□□ -1.41
CAPN3P20807 SNRPCP6-201ENST00000528310 210 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 AL445383.1-201ENST00000554689 874 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 AP003115.1-201ENST00000569849 463 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.26□□□□□ -1.41
CAPN3P20807 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.26□□□□□ -1.41
CAPN3P20807 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.26□□□□□ -1.41
CAPN3P20807 BMS1P7-201ENST00000602440 1052 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 AL049840.5-201ENST00000602827 552 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 AC073111.2-201ENST00000605657 1075 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 MIR6503-201ENST00000622884 86 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 AC006328.2-201ENST00000623198 397 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 AC012005.2-201ENST00000624333 397 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.26□□□□□ -1.41
CAPN3P20807 AC073869.7-201ENST00000640874 297 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 AC010168.2-201ENST00000562691 5428 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 AL353743.3-201ENST00000442109 1468 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 AC007114.2-201ENST00000576014 4281 ntBASIC6.26□□□□□ -1.41
CAPN3P20807 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CAPN3P20807 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CAPN3P20807 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.25□□□□□ -1.41
CAPN3P20807 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.25□□□□□ -1.41
CAPN3P20807 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.25□□□□□ -1.41
CAPN3P20807 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.25□□□□□ -1.41
CAPN3P20807 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CAPN3P20807 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CAPN3P20807 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.25□□□□□ -1.41
CAPN3P20807 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CAPN3P20807 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CAPN3P20807 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CAPN3P20807 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CAPN3P20807 AP003486.1-201ENST00000525716 3994 ntBASIC6.25□□□□□ -1.41
CAPN3P20807 AC068870.3-201ENST00000625077 2536 ntBASIC6.25□□□□□ -1.41
CAPN3P20807 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CAPN3P20807 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CAPN3P20807 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.25□□□□□ -1.41
CAPN3P20807 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CAPN3P20807 RN7SKP171-201ENST00000364417 303 ntBASIC6.25□□□□□ -1.41
CAPN3P20807 RNU6-152P-201ENST00000384037 107 ntBASIC6.25□□□□□ -1.41
CAPN3P20807 RNA5SP176-201ENST00000390956 110 ntBASIC6.25□□□□□ -1.41
CAPN3P20807 YWHAZP4-201ENST00000392459 708 ntBASIC6.25□□□□□ -1.41
CAPN3P20807 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.25□□□□□ -1.41
CAPN3P20807 AL590623.1-201ENST00000427864 105 ntBASIC6.25□□□□□ -1.41
CAPN3P20807 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.25□□□□□ -1.41
CAPN3P20807 RPS10P21-201ENST00000430654 475 ntBASIC6.25□□□□□ -1.41
CAPN3P20807 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.25□□□□□ -1.41
CAPN3P20807 AC093166.3-201ENST00000448785 303 ntBASIC6.25□□□□□ -1.41
CAPN3P20807 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CAPN3P20807 RPL26P30-201ENST00000453533 435 ntBASIC6.25□□□□□ -1.41
CAPN3P20807 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.25□□□□□ -1.41
CAPN3P20807 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.25□□□□□ -1.41
CAPN3P20807 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.25□□□□□ -1.41
CAPN3P20807 AC108157.1-201ENST00000510511 539 ntBASIC6.25□□□□□ -1.41
CAPN3P20807 HMGB1P47-201ENST00000511281 589 ntBASIC6.25□□□□□ -1.41
CAPN3P20807 ACTR6P1-201ENST00000514311 1104 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms