Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXC6P09630 MIR375-201ENST00000362103 64 ntBASIC6.95□□□□□ -1.3
HOXC6P09630 RNA5SP478-201ENST00000364657 115 ntBASIC6.95□□□□□ -1.3
HOXC6P09630 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
HOXC6P09630 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXC6P09630 MIR1178-201ENST00000408396 91 ntBASIC6.95□□□□□ -1.3
HOXC6P09630 RN7SKP278-201ENST00000410504 342 ntBASIC6.95□□□□□ -1.3
HOXC6P09630 RN7SKP161-201ENST00000411110 305 ntBASIC6.95□□□□□ -1.3
HOXC6P09630 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.95□□□□□ -1.3
HOXC6P09630 AL096829.1-201ENST00000413677 457 ntBASIC6.95□□□□□ -1.3
HOXC6P09630 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.95□□□□□ -1.3
HOXC6P09630 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.95□□□□□ -1.3
HOXC6P09630 AC012497.1-201ENST00000429392 575 ntBASIC6.95□□□□□ -1.3
HOXC6P09630 YWHAEP1-201ENST00000453697 763 ntBASIC6.95□□□□□ -1.3
HOXC6P09630 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXC6P09630 IGKV2-19-201ENST00000518132 283 ntBASIC6.95□□□□□ -1.3
HOXC6P09630 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXC6P09630 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.95□□□□□ -1.3
HOXC6P09630 PCNAP4-201ENST00000532690 730 ntBASIC6.95□□□□□ -1.3
HOXC6P09630 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.95□□□□□ -1.3
HOXC6P09630 AC022404.1-201ENST00000555320 273 ntBASIC6.95□□□□□ -1.3
HOXC6P09630 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.95□□□□□ -1.3
HOXC6P09630 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXC6P09630 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXC6P09630 RPL12P48-201ENST00000605620 304 ntBASIC6.95□□□□□ -1.3
HOXC6P09630 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.95□□□□□ -1.3
HOXC6P09630 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
HOXC6P09630 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXC6P09630 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXC6P09630 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXC6P09630 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXC6P09630 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXC6P09630 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HOXC6P09630 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXC6P09630 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXC6P09630 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.94□□□□□ -1.3
HOXC6P09630 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXC6P09630 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC6.94□□□□□ -1.3
HOXC6P09630 AP002370.1-201ENST00000528055 1602 ntBASIC6.94□□□□□ -1.3
HOXC6P09630 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.94□□□□□ -1.3
HOXC6P09630 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HOXC6P09630 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
HOXC6P09630 PARP4P1-201ENST00000435945 2337 ntBASIC6.94□□□□□ -1.3
HOXC6P09630 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.94□□□□□ -1.3
HOXC6P09630 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.94□□□□□ -1.3
HOXC6P09630 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXC6P09630 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXC6P09630 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXC6P09630 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXC6P09630 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HOXC6P09630 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HOXC6P09630 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.94□□□□□ -1.3
HOXC6P09630 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.94□□□□□ -1.3
HOXC6P09630 RNA5SP362-201ENST00000516048 118 ntBASIC6.94□□□□□ -1.3
HOXC6P09630 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.94□□□□□ -1.3
HOXC6P09630 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXC6P09630 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HOXC6P09630 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
HOXC6P09630 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.94□□□□□ -1.3
HOXC6P09630 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
HOXC6P09630 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HOXC6P09630 AC127024.8-201ENST00000623719 2094 ntBASIC6.94□□□□□ -1.3
HOXC6P09630 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.94□□□□□ -1.3
HOXC6P09630 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
HOXC6P09630 AC012254.3-201ENST00000591183 2117 ntBASIC6.94□□□□□ -1.3
HOXC6P09630 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.93□□□□□ -1.3
HOXC6P09630 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.93□□□□□ -1.3
HOXC6P09630 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
HOXC6P09630 OR11H13P-201ENST00000359695 979 ntBASIC6.93□□□□□ -1.3
HOXC6P09630 OR3A2-201ENST00000408891 1076 ntBASIC6.93□□□□□ -1.3
HOXC6P09630 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.93□□□□□ -1.3
HOXC6P09630 FABP5P2-201ENST00000439042 408 ntBASIC6.93□□□□□ -1.3
HOXC6P09630 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.93□□□□□ -1.3
HOXC6P09630 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.93□□□□□ -1.3
HOXC6P09630 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.93□□□□□ -1.3
HOXC6P09630 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 CYCSP22-201ENST00000517555 339 ntBASIC6.93□□□□□ -1.3
HOXC6P09630 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.93□□□□□ -1.3
HOXC6P09630 RPA2P3-201ENST00000533268 770 ntBASIC6.93□□□□□ -1.3
HOXC6P09630 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXC6P09630 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HOXC6P09630 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.93□□□□□ -1.3
HOXC6P09630 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.93□□□□□ -1.3
HOXC6P09630 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HOXC6P09630 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
HOXC6P09630 AC233702.7-202ENST00000582941 211 ntBASIC6.93□□□□□ -1.3
HOXC6P09630 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.93□□□□□ -1.3
HOXC6P09630 AL589674.2-201ENST00000604304 337 ntBASIC6.93□□□□□ -1.3
HOXC6P09630 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms