Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.83□□□□□ -1.16
HMGB1P09429 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC7.83□□□□□ -1.16
HMGB1P09429 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC7.83□□□□□ -1.16
HMGB1P09429 OR7E19P-202ENST00000589942 844 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.83□□□□□ -1.16
HMGB1P09429 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.83□□□□□ -1.16
HMGB1P09429 BUB1P1-201ENST00000603541 607 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 AL157899.1-201ENST00000604110 936 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 AL355802.4-201ENST00000607635 548 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 AP003497.2-201ENST00000624220 967 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.83□□□□□ -1.16
HMGB1P09429 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.83□□□□□ -1.16
HMGB1P09429 AC009220.2-201ENST00000489759 1751 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 RBPJP6-201ENST00000411556 1431 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 AC005332.9-201ENST00000620266 2921 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HMGB1P09429 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
HMGB1P09429 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HMGB1P09429 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HMGB1P09429 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HMGB1P09429 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HMGB1P09429 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.83□□□□□ -1.16
HMGB1P09429 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HMGB1P09429 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
HMGB1P09429 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
HMGB1P09429 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HMGB1P09429 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC7.82□□□□□ -1.16
HMGB1P09429 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HMGB1P09429 AL731556.1-201ENST00000394628 3711 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HMGB1P09429 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
HMGB1P09429 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HMGB1P09429 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 RNA5SP350-201ENST00000363298 111 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HMGB1P09429 RNU1-74P-201ENST00000384108 171 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 RNU6-225P-201ENST00000384613 103 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 ATP5HP3-201ENST00000396994 486 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 AL023284.3-201ENST00000407767 334 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.82□□□□□ -1.16
HMGB1P09429 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.82□□□□□ -1.16
HMGB1P09429 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC7.82□□□□□ -1.16
HMGB1P09429 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HMGB1P09429 RPS10P14-201ENST00000440748 502 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HMGB1P09429 AL121578.2-201ENST00000448797 447 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 MTND2P25-201ENST00000449028 610 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 AC022080.2-201ENST00000452932 533 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 RPL36AP55-201ENST00000454114 305 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 AC236972.4-201ENST00000458091 963 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 AC073610.1-201ENST00000489971 396 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.82□□□□□ -1.16
HMGB1P09429 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.82□□□□□ -1.16
HMGB1P09429 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.82□□□□□ -1.16
HMGB1P09429 AC095052.1-201ENST00000509955 863 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.82□□□□□ -1.16
HMGB1P09429 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC7.82□□□□□ -1.16
HMGB1P09429 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.82□□□□□ -1.16
HMGB1P09429 RN7SKP196-201ENST00000516267 345 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.82□□□□□ -1.16
HMGB1P09429 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.82□□□□□ -1.16
HMGB1P09429 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
HMGB1P09429 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.82□□□□□ -1.16
HMGB1P09429 AC027667.1-201ENST00000545814 304 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.82□□□□□ -1.16
HMGB1P09429 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.82□□□□□ -1.16
HMGB1P09429 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.82□□□□□ -1.16
HMGB1P09429 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.82□□□□□ -1.16
HMGB1P09429 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
HMGB1P09429 AC245052.7-201ENST00000601161 359 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 AC007204.1-201ENST00000621794 555 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 AP001005.3-201ENST00000622049 129 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
HMGB1P09429 HPVC1-201ENST00000629899 1198 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HMGB1P09429 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
HMGB1P09429 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.82□□□□□ -1.16
HMGB1P09429 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HMGB1P09429 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HMGB1P09429 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.82□□□□□ -1.16
HMGB1P09429 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HMGB1P09429 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HMGB1P09429 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HMGB1P09429 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.81□□□□□ -1.16
HMGB1P09429 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HMGB1P09429 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC7.81□□□□□ -1.16
HMGB1P09429 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.81□□□□□ -1.16
HMGB1P09429 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.81□□□□□ -1.16
HMGB1P09429 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HMGB1P09429 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HMGB1P09429 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HMGB1P09429 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
HMGB1P09429 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
HMGB1P09429 FAM32BP-201ENST00000344033 333 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 MIR431-201ENST00000385266 114 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 MIR320B1-201ENST00000390209 79 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 AL050335.1-201ENST00000396909 869 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 Z86062.1-201ENST00000406773 777 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms