Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 SMG1P2-201ENST00000566127 4221 ntBASIC5.21□□□□□ -1.58
HLA-DQB1P01920 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DQB1P01920 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DQB1P01920 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 THAP12P9-201ENST00000503971 2360 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 RNA5SP429-201ENST00000363688 109 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AL139135.1-201ENST00000412675 209 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AL121878.1-201ENST00000418638 859 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 CLCN3P1-201ENST00000423965 1017 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AL138479.1-201ENST00000426913 484 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AL929410.2-201ENST00000451170 189 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 RBMY2EP-202ENST00000456360 940 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 RN7SL643P-201ENST00000471845 291 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 RPS3AP49-201ENST00000472161 790 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 RN7SL836P-201ENST00000476140 296 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 SEPT10P1-201ENST00000517342 1162 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AP001858.2-201ENST00000536213 601 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AL121594.2-201ENST00000541658 472 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AC133552.4-201ENST00000576103 676 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AL157762.1-201ENST00000619612 415 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 AL121985.3-201ENST00000620690 523 ntBASIC5.2□□□□□ -1.58
HLA-DQB1P01920 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB1P01920 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 OR7A2P-201ENST00000304105 930 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 AC026310.1-201ENST00000396004 378 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 AC121334.1-201ENST00000396414 802 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 MYL6P5-201ENST00000412707 459 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 CDC42P6-201ENST00000421246 576 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 NMD3P2-201ENST00000421815 761 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 AC096632.2-201ENST00000438139 1239 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 COL11A2P1-205ENST00000441798 676 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 AC083899.1-201ENST00000454465 3819 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 RN7SL70P-201ENST00000478322 302 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 CCDC11P1-201ENST00000503137 1162 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 AC105391.1-201ENST00000503155 1045 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 AC018645.1-201ENST00000505003 109 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 SNX18P24-201ENST00000505249 671 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 AC093870.1-201ENST00000506837 213 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 RN7SKP288-201ENST00000516227 268 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 AC090424.1-201ENST00000535243 736 ntBASIC5.19□□□□□ -1.58
HLA-DQB1P01920 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DQB1P01920 RPL3P13-201ENST00000550415 216 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms