Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.48□□□□□ -1.37
MSI1O43347 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.48□□□□□ -1.37
MSI1O43347 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.48□□□□□ -1.37
MSI1O43347 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MSI1O43347 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.48□□□□□ -1.37
MSI1O43347 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
MSI1O43347 AC007679.3-201ENST00000434035 414 ntBASIC6.48□□□□□ -1.37
MSI1O43347 PPIAP10-201ENST00000438675 458 ntBASIC6.48□□□□□ -1.37
MSI1O43347 RPL5P7-201ENST00000444235 813 ntBASIC6.48□□□□□ -1.37
MSI1O43347 AL451063.1-201ENST00000450164 1133 ntBASIC6.48□□□□□ -1.37
MSI1O43347 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.48□□□□□ -1.37
MSI1O43347 RNU4-18P-201ENST00000516751 149 ntBASIC6.48□□□□□ -1.37
MSI1O43347 RN7SKP35-201ENST00000517210 151 ntBASIC6.48□□□□□ -1.37
MSI1O43347 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.48□□□□□ -1.37
MSI1O43347 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.48□□□□□ -1.37
MSI1O43347 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.48□□□□□ -1.37
MSI1O43347 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.48□□□□□ -1.37
MSI1O43347 AP005639.1-201ENST00000526939 192 ntBASIC6.48□□□□□ -1.37
MSI1O43347 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.48□□□□□ -1.37
MSI1O43347 AC006512.2-201ENST00000543250 486 ntBASIC6.48□□□□□ -1.37
MSI1O43347 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.48□□□□□ -1.37
MSI1O43347 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.48□□□□□ -1.37
MSI1O43347 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.48□□□□□ -1.37
MSI1O43347 MIR4271-201ENST00000582451 67 ntBASIC6.48□□□□□ -1.37
MSI1O43347 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MSI1O43347 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.48□□□□□ -1.37
MSI1O43347 AC073333.2-201ENST00000603589 769 ntBASIC6.48□□□□□ -1.37
MSI1O43347 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.48□□□□□ -1.37
MSI1O43347 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.48□□□□□ -1.37
MSI1O43347 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.48□□□□□ -1.37
MSI1O43347 RFPL4AP6-201ENST00000616792 846 ntBASIC6.48□□□□□ -1.37
MSI1O43347 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.48□□□□□ -1.37
MSI1O43347 OR7A1P-202ENST00000641542 1158 ntBASIC6.48□□□□□ -1.37
MSI1O43347 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.48□□□□□ -1.37
MSI1O43347 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
MSI1O43347 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.48□□□□□ -1.37
MSI1O43347 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MSI1O43347 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.48□□□□□ -1.37
MSI1O43347 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MSI1O43347 IFIT1P1-201ENST00000400497 1449 ntBASIC6.48□□□□□ -1.37
MSI1O43347 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
MSI1O43347 AP001541.1-201ENST00000623322 1904 ntBASIC6.48□□□□□ -1.37
MSI1O43347 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MSI1O43347 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MSI1O43347 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.48□□□□□ -1.37
MSI1O43347 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
MSI1O43347 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.48□□□□□ -1.37
MSI1O43347 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.48□□□□□ -1.37
MSI1O43347 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.48□□□□□ -1.37
MSI1O43347 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
MSI1O43347 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MSI1O43347 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.47□□□□□ -1.37
MSI1O43347 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.47□□□□□ -1.37
MSI1O43347 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MSI1O43347 AC011504.1-201ENST00000623331 4103 ntBASIC6.47□□□□□ -1.37
MSI1O43347 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MSI1O43347 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.47□□□□□ -1.37
MSI1O43347 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.47□□□□□ -1.37
MSI1O43347 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
MSI1O43347 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MSI1O43347 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.47□□□□□ -1.37
MSI1O43347 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
MSI1O43347 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
MSI1O43347 SNORA43.1-201ENST00000364863 140 ntBASIC6.47□□□□□ -1.37
MSI1O43347 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.47□□□□□ -1.37
MSI1O43347 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.47□□□□□ -1.37
MSI1O43347 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
MSI1O43347 SNORA40.4-201ENST00000390971 128 ntBASIC6.47□□□□□ -1.37
MSI1O43347 OR7E156P-201ENST00000400303 464 ntBASIC6.47□□□□□ -1.37
MSI1O43347 DHFRP5-201ENST00000406944 564 ntBASIC6.47□□□□□ -1.37
MSI1O43347 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.47□□□□□ -1.37
MSI1O43347 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.47□□□□□ -1.37
MSI1O43347 AC023141.3-201ENST00000436698 278 ntBASIC6.47□□□□□ -1.37
MSI1O43347 AC016908.1-201ENST00000442571 1219 ntBASIC6.47□□□□□ -1.37
MSI1O43347 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.47□□□□□ -1.37
MSI1O43347 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MSI1O43347 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.47□□□□□ -1.37
MSI1O43347 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
MSI1O43347 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.47□□□□□ -1.37
MSI1O43347 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MSI1O43347 RNU6-964P-201ENST00000516524 69 ntBASIC6.47□□□□□ -1.37
MSI1O43347 AC005363.1-201ENST00000530779 351 ntBASIC6.47□□□□□ -1.37
MSI1O43347 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
MSI1O43347 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.47□□□□□ -1.37
MSI1O43347 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.47□□□□□ -1.37
MSI1O43347 AC026826.3-201ENST00000561747 158 ntBASIC6.47□□□□□ -1.37
MSI1O43347 AC007346.1-201ENST00000569208 867 ntBASIC6.47□□□□□ -1.37
MSI1O43347 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.47□□□□□ -1.37
MSI1O43347 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
MSI1O43347 MIR3189-201ENST00000578735 73 ntBASIC6.47□□□□□ -1.37
MSI1O43347 AC134669.1-201ENST00000581275 672 ntBASIC6.47□□□□□ -1.37
MSI1O43347 DYNLL1P1-201ENST00000595442 269 ntBASIC6.47□□□□□ -1.37
MSI1O43347 AC011497.2-201ENST00000600255 639 ntBASIC6.47□□□□□ -1.37
MSI1O43347 AL499605.1-201ENST00000604628 403 ntBASIC6.47□□□□□ -1.37
MSI1O43347 BX323046.1-201ENST00000610145 535 ntBASIC6.47□□□□□ -1.37
MSI1O43347 AC097641.3-201ENST00000613523 464 ntBASIC6.47□□□□□ -1.37
MSI1O43347 AL352984.2-202ENST00000613699 155 ntBASIC6.47□□□□□ -1.37
MSI1O43347 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
MSI1O43347 AP003789.1-201ENST00000617737 605 ntBASIC6.47□□□□□ -1.37
MSI1O43347 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms