Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CREM-230ENST00000474931 626 ntTSL 2 BASIC10.36□□□□□ -0.75
CUX2O14529 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC10.36□□□□□ -0.75
CUX2O14529 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC10.36□□□□□ -0.75
CUX2O14529 AL392048.1-201ENST00000613946 534 ntBASIC10.36□□□□□ -0.75
CUX2O14529 AC016717.3-201ENST00000624730 554 ntBASIC10.36□□□□□ -0.75
CUX2O14529 SPATA31B1P-201ENST00000434692 4016 ntBASIC10.35□□□□□ -0.75
CUX2O14529 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
CUX2O14529 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CUX2O14529 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CUX2O14529 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CUX2O14529 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CUX2O14529 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CUX2O14529 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CUX2O14529 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
CUX2O14529 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CUX2O14529 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC10.35□□□□□ -0.75
CUX2O14529 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CUX2O14529 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
CUX2O14529 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
CUX2O14529 RPL23P2-201ENST00000320371 421 ntBASIC10.35□□□□□ -0.75
CUX2O14529 RN7SKP128-201ENST00000364270 303 ntBASIC10.35□□□□□ -0.75
CUX2O14529 MIR541-201ENST00000401360 84 ntBASIC10.35□□□□□ -0.75
CUX2O14529 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC10.35□□□□□ -0.75
CUX2O14529 RPL7P56-201ENST00000429441 717 ntBASIC10.35□□□□□ -0.75
CUX2O14529 MORF4-201ENST00000447135 971 ntBASIC10.35□□□□□ -0.75
CUX2O14529 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC10.35□□□□□ -0.75
CUX2O14529 AC023245.1-201ENST00000468501 517 ntBASIC10.35□□□□□ -0.75
CUX2O14529 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CUX2O14529 SLC25A15P5-201ENST00000508033 253 ntBASIC10.35□□□□□ -0.75
CUX2O14529 AC106800.3-201ENST00000511389 308 ntBASIC10.35□□□□□ -0.75
CUX2O14529 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC10.35□□□□□ -0.75
CUX2O14529 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC10.35□□□□□ -0.75
CUX2O14529 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC10.35□□□□□ -0.75
CUX2O14529 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
CUX2O14529 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
CUX2O14529 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC10.34□□□□□ -0.75
CUX2O14529 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC10.34□□□□□ -0.75
CUX2O14529 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CUX2O14529 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CUX2O14529 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CUX2O14529 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CUX2O14529 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CUX2O14529 EEF1A1P29-201ENST00000416082 1096 ntBASIC10.34□□□□□ -0.75
CUX2O14529 CYCSP12-201ENST00000437729 300 ntBASIC10.34□□□□□ -0.75
CUX2O14529 AC015720.2-201ENST00000567709 334 ntBASIC10.34□□□□□ -0.75
CUX2O14529 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC10.34□□□□□ -0.75
CUX2O14529 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC10.34□□□□□ -0.75
CUX2O14529 AC083809.1-201ENST00000615051 472 ntBASIC10.34□□□□□ -0.75
CUX2O14529 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC10.34□□□□□ -0.75
CUX2O14529 ATM-229ENST00000639953 587 ntTSL 5 BASIC10.34□□□□□ -0.75
CUX2O14529 MAPK10-350ENST00000641777 965 ntBASIC10.34□□□□□ -0.75
CUX2O14529 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC10.34□□□□□ -0.75
CUX2O14529 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CUX2O14529 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
CUX2O14529 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
CUX2O14529 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CUX2O14529 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CUX2O14529 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CUX2O14529 AL136981.1-203ENST00000451452 3844 ntBASIC10.33□□□□□ -0.76
CUX2O14529 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC10.33□□□□□ -0.76
CUX2O14529 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
CUX2O14529 EPS15P1-202ENST00000459691 2071 ntBASIC10.33□□□□□ -0.76
CUX2O14529 AL713922.1-201ENST00000416477 747 ntBASIC10.33□□□□□ -0.76
CUX2O14529 AL133325.1-201ENST00000421090 382 ntBASIC10.33□□□□□ -0.76
CUX2O14529 AL360081.1-201ENST00000428299 555 ntBASIC10.33□□□□□ -0.76
CUX2O14529 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC10.33□□□□□ -0.76
CUX2O14529 AC091180.1-201ENST00000462104 372 ntBASIC10.33□□□□□ -0.76
CUX2O14529 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CUX2O14529 AC022215.1-201ENST00000481770 362 ntBASIC10.33□□□□□ -0.76
CUX2O14529 RN7SL604P-201ENST00000492589 296 ntBASIC10.33□□□□□ -0.76
CUX2O14529 AC105233.1-201ENST00000498840 781 ntBASIC10.33□□□□□ -0.76
CUX2O14529 PGAM1P13-201ENST00000507497 754 ntBASIC10.33□□□□□ -0.76
CUX2O14529 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC10.33□□□□□ -0.76
CUX2O14529 AC130448.2-201ENST00000624082 374 ntBASIC10.33□□□□□ -0.76
CUX2O14529 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CUX2O14529 MFSD8-216ENST00000641147 4009 ntBASIC10.33□□□□□ -0.76
CUX2O14529 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC10.33□□□□□ -0.76
CUX2O14529 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CUX2O14529 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC10.33□□□□□ -0.76
CUX2O14529 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CUX2O14529 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC10.33□□□□□ -0.76
CUX2O14529 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CUX2O14529 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CUX2O14529 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CUX2O14529 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CUX2O14529 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CUX2O14529 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CUX2O14529 MIR192-201ENST00000384915 110 ntBASIC10.32□□□□□ -0.76
CUX2O14529 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC10.32□□□□□ -0.76
CUX2O14529 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC10.32□□□□□ -0.76
CUX2O14529 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC10.32□□□□□ -0.76
CUX2O14529 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC10.32□□□□□ -0.76
CUX2O14529 AC113412.1-201ENST00000425840 504 ntBASIC10.32□□□□□ -0.76
CUX2O14529 AL022331.1-201ENST00000429025 477 ntBASIC10.32□□□□□ -0.76
CUX2O14529 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
CUX2O14529 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC10.32□□□□□ -0.76
CUX2O14529 AC011753.3-201ENST00000443436 406 ntBASIC10.32□□□□□ -0.76
CUX2O14529 GAPDHP23-201ENST00000444823 993 ntBASIC10.32□□□□□ -0.76
CUX2O14529 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
CUX2O14529 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms