Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 AC009948.5-201ENST00000624360 4406 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 NCOA4P2-201ENST00000340589 1813 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 NCLP2-201ENST00000416078 1462 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 RNA5SP472-201ENST00000363868 119 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AL390774.1-201ENST00000411924 246 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC004074.1-201ENST00000421810 1063 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 ANKRD54P1-201ENST00000433115 471 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 RPL7L1P11-201ENST00000446092 721 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 HMGB1P5-202ENST00000451497 985 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 RPL31P11-202ENST00000454082 372 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 BX323845.2-201ENST00000458382 234 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC117394.1-201ENST00000477323 567 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC092045.1-201ENST00000495716 1231 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC025459.1-201ENST00000504072 156 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC008885.2-201ENST00000509506 930 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AP005597.2-201ENST00000526238 341 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 GLYATL1P4-201ENST00000529326 906 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 RERGL-202ENST00000536890 367 ntTSL 3 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 MIR4428-201ENST00000584884 73 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC026367.2-201ENST00000610630 553 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 MIR6889-201ENST00000613185 59 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC007204.2-201ENST00000615022 616 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC073569.3-201ENST00000619055 682 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC008626.2-201ENST00000624425 248 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC007494.3-201ENST00000624660 743 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC140479.4-205ENST00000636339 820 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USP17L11C9JVI0 AC017007.4-201ENST00000503353 1352 ntBASIC8.34□□□□□ -1.07
USP17L11C9JVI0 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
USP17L11C9JVI0 API5P1-201ENST00000424316 1510 ntBASIC8.34□□□□□ -1.08
USP17L11C9JVI0 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 CCDC150P1-201ENST00000537123 2215 ntBASIC8.33□□□□□ -1.08
USP17L11C9JVI0 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 SNORA40.2-201ENST00000390847 128 ntBASIC8.33□□□□□ -1.08
USP17L11C9JVI0 LDHAP5-201ENST00000394996 622 ntBASIC8.33□□□□□ -1.08
USP17L11C9JVI0 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 CNN3P1-201ENST00000401596 935 ntBASIC8.33□□□□□ -1.08
USP17L11C9JVI0 AL355375.1-201ENST00000405686 392 ntBASIC8.33□□□□□ -1.08
USP17L11C9JVI0 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 Z82198.3-201ENST00000421145 199 ntBASIC8.33□□□□□ -1.08
USP17L11C9JVI0 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 AL035458.1-201ENST00000433096 585 ntBASIC8.33□□□□□ -1.08
USP17L11C9JVI0 AC096632.2-201ENST00000438139 1239 ntBASIC8.33□□□□□ -1.08
USP17L11C9JVI0 EMC3-AS1-205ENST00000438698 534 ntBASIC8.33□□□□□ -1.08
USP17L11C9JVI0 MTND2P20-201ENST00000440805 661 ntBASIC8.33□□□□□ -1.08
USP17L11C9JVI0 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 KF459542.1-201ENST00000450908 553 ntBASIC8.33□□□□□ -1.08
USP17L11C9JVI0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 AC022080.2-201ENST00000452932 533 ntBASIC8.33□□□□□ -1.08
USP17L11C9JVI0 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 SRRM1P2-201ENST00000464531 1192 ntBASIC8.33□□□□□ -1.08
USP17L11C9JVI0 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.33□□□□□ -1.08
USP17L11C9JVI0 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms