Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
CCDC78A2IDD5 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC78A2IDD5 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC78A2IDD5 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC78A2IDD5 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CCDC78A2IDD5 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC78A2IDD5 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC78A2IDD5 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC78A2IDD5 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.59□□□□□ -1.36
CCDC78A2IDD5 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.59□□□□□ -1.36
CCDC78A2IDD5 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC78A2IDD5 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.59□□□□□ -1.36
CCDC78A2IDD5 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 PPIAP24-201ENST00000328558 471 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 RN7SKP184-201ENST00000362348 333 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC092634.1-201ENST00000366505 199 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 RNU6-1257P-201ENST00000384625 110 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AL353133.1-201ENST00000407695 401 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 BMS1P13-201ENST00000417301 885 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC114973.1-201ENST00000429057 632 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 TVP23CP1-201ENST00000450317 639 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 RPS3AP53-201ENST00000454716 778 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 RN7SL836P-201ENST00000476140 296 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC022206.1-201ENST00000495947 347 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 H3F3AP3-201ENST00000497682 407 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 RN7SKP196-201ENST00000516267 345 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC079148.1-201ENST00000565944 819 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 RPL29P33-201ENST00000587474 316 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AL078623.1-201ENST00000602702 907 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC005828.7-201ENST00000607331 556 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AC018926.1-201ENST00000616335 435 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 FANCD2P2-201ENST00000437591 1400 ntBASIC6.58□□□□□ -1.36
CCDC78A2IDD5 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC78A2IDD5 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 NEK2P2-201ENST00000438441 1338 ntBASIC6.57□□□□□ -1.36
CCDC78A2IDD5 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 AL359976.1-201ENST00000418655 3528 ntBASIC6.57□□□□□ -1.36
CCDC78A2IDD5 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 RNA5SP308-201ENST00000362532 115 ntBASIC6.57□□□□□ -1.36
CCDC78A2IDD5 RNA5SP140-201ENST00000364524 92 ntBASIC6.57□□□□□ -1.36
CCDC78A2IDD5 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 CCNB2P1-201ENST00000399411 1150 ntBASIC6.57□□□□□ -1.36
CCDC78A2IDD5 FDPSP5-201ENST00000399474 1057 ntBASIC6.57□□□□□ -1.36
CCDC78A2IDD5 RPL5P20-201ENST00000403848 896 ntBASIC6.57□□□□□ -1.36
CCDC78A2IDD5 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 AC106883.1-201ENST00000418805 562 ntBASIC6.57□□□□□ -1.36
CCDC78A2IDD5 RPL12P43-201ENST00000420608 499 ntBASIC6.57□□□□□ -1.36
CCDC78A2IDD5 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC78A2IDD5 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms