Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AC093392.2-201ENST00000450682 337 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 PTGES3P5-201ENST00000455109 434 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 RPLP0P1-201ENST00000457002 361 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AL133477.1-201ENST00000457472 514 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 RN7SL251P-201ENST00000464175 297 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 RN7SL149P-201ENST00000465197 281 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 RN7SL751P-201ENST00000473281 284 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AC068724.1-201ENST00000487100 792 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 RPL10P7-201ENST00000495649 625 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AC024451.1-201ENST00000508013 779 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 C1GALT1P3-201ENST00000522049 819 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 OR5M4P-201ENST00000529436 925 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 BLZF2P-201ENST00000553776 1130 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AL354760.1-201ENST00000608357 643 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AC135507.2-201ENST00000612443 309 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AL356321.1-201ENST00000621360 228 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 CASC22-202ENST00000628396 802 ntTSL 5 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 MFSD8-217ENST00000641178 4374 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AC008937.3-201ENST00000606813 1700 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 SNORD113-6-201ENST00000363345 75 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 SSX6-201ENST00000376932 562 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 RPS3AP5-201ENST00000389400 821 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 GAPDHP51-201ENST00000426454 1000 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 UBE2V1P8-201ENST00000437166 265 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 BMS1P10-201ENST00000443754 1120 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 AC007677.1-201ENST00000445757 515 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 VN1R96P-201ENST00000446052 858 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 RHEBP1-201ENST00000448647 556 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 USP9YP34-201ENST00000453983 808 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 TDGF1P6-201ENST00000463873 448 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 NENFP3-201ENST00000503735 313 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 MRPL57P6-201ENST00000506570 309 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 HNRNPRP2-201ENST00000528421 743 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 AP002963.1-201ENST00000530590 184 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 AGGF1P9-201ENST00000561884 913 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 RN7SL835P-201ENST00000579920 262 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 IGLJCOR18-201ENST00000584002 424 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 IGKV2OR2-7-201ENST00000604652 304 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 AC009878.1-201ENST00000621819 340 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 JAML-213ENST00000640745 951 ntTSL 5 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 NF1P8-201ENST00000415351 1461 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 SLC2A3P4-201ENST00000521259 1471 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 AC069222.1-201ENST00000608028 3360 ntBASIC9.44□□□□□ -0.9
PDZRN3Q9UPQ7 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms