Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC079456.1-201ENST00000624010 480 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 DDX18P6-201ENST00000450119 1997 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 DDX11L16-201ENST00000507418 1306 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC130464.1-201ENST00000416201 1500 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AL672167.2-201ENST00000377164 879 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 VN2R17P-201ENST00000391712 832 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 OLA1P1-201ENST00000396387 1189 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 LARP1P1-201ENST00000407692 292 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 RNU2-17P-201ENST00000410290 190 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 RPL21P111-201ENST00000418453 477 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 SDCBPP3-201ENST00000419629 891 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 PSMD8P1-201ENST00000436275 769 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 Z99127.3-201ENST00000448158 395 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 RN7SL91P-201ENST00000469313 291 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 RPL35AP19-201ENST00000469425 329 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 RPL7P18-201ENST00000478965 734 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 NCOR1P1-202ENST00000486162 291 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 RN7SL445P-201ENST00000495609 293 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC008799.1-201ENST00000495909 457 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 RPL7AP2-201ENST00000496515 740 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC073648.3-201ENST00000504939 925 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 RNU6-358P-201ENST00000516564 75 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 PTK2-241ENST00000522950 548 ntTSL 4 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 OR4A40P-201ENST00000533878 948 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC008126.1-201ENST00000549019 480 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC090699.1-201ENST00000586264 321 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC087645.1-201ENST00000588528 291 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 ACP5-208ENST00000590420 301 ntTSL 5 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 FXYD6P1-201ENST00000604857 285 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AL442067.2-201ENST00000614033 363 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 MIR7844-201ENST00000616161 122 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 AC090574.1-201ENST00000623186 233 ntBASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CUEDC1Q9NWM3 TMEM75-201ENST00000624314 2165 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 FMO9P-202ENST00000488458 1535 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC132825.1-201ENST00000463573 2247 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms