Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC006600.2-201ENST00000624834 2506 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 MAPK10-270ENST00000641102 3538 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 COX6B1P3-201ENST00000312310 260 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 SNORD16-201ENST00000362803 99 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC112492.2-201ENST00000432774 1030 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC007000.2-201ENST00000442564 487 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC002486.2-201ENST00000447806 590 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC093663.2-201ENST00000484625 313 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 SNX18P24-201ENST00000505249 671 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 IGHV4-55-201ENST00000520889 368 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC090115.2-201ENST00000548060 883 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC104072.1-201ENST00000568817 668 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 RN7SL475P-201ENST00000583379 298 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 MIR4760-201ENST00000585040 80 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC015911.5-201ENST00000587076 451 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 AL138895.2-201ENST00000603019 178 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 AL049840.6-201ENST00000604583 345 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 PCA3_2.1-201ENST00000612507 409 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC016597.2-201ENST00000613256 341 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 AC005393.1-201ENST00000617916 584 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 SAGE3P-201ENST00000619800 1635 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 NEK2P4-201ENST00000425793 1329 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 AL512310.3-201ENST00000547023 1335 ntBASIC7.27□□□□□ -1.25
VTA1Q9NP79 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 CASC19-228ENST00000641414 1684 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
VTA1Q9NP79 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
VTA1Q9NP79 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 Z93929.1-201ENST00000418200 1475 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VTA1Q9NP79 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VTA1Q9NP79 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VTA1Q9NP79 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VTA1Q9NP79 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
VTA1Q9NP79 SNORA63.3-201ENST00000362682 132 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 RNU6-1331P-201ENST00000363658 106 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VTA1Q9NP79 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 RNU1-46P-201ENST00000384425 164 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC004386.1-201ENST00000393214 761 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC098592.2-201ENST00000413158 265 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 AL157884.1-201ENST00000424561 454 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 NPM1P25-201ENST00000429734 854 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 ZNF965P-201ENST00000432501 817 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC097463.1-201ENST00000447288 481 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC068228.1-201ENST00000461723 211 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC022415.1-202ENST00000486612 523 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC063943.2-201ENST00000495697 534 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC010468.3-201ENST00000508225 458 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 UGT2A3P7-201ENST00000510485 734 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 RNU6-319P-201ENST00000516025 108 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 RNU6-1334P-201ENST00000516032 105 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 RNU6-889P-201ENST00000517189 103 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 VTA1P2-201ENST00000520205 911 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms