Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 HSD3BP3-201ENST00000514706 994 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC023632.1-201ENST00000518463 375 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 MTND6P19-201ENST00000519399 524 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 ZNF705CP-201ENST00000530515 889 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AL121821.2-201ENST00000556081 394 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 MIR4528-201ENST00000577763 90 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 MIR4428-201ENST00000584884 73 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 RPS4XP21-201ENST00000603814 750 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC140658.6-201ENST00000603958 201 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 CUX2P1-201ENST00000606426 298 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC087623.4-201ENST00000606593 695 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC026951.2-201ENST00000613847 241 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AL607023.1-201ENST00000620045 248 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC012414.7-202ENST00000622705 1090 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC068213.1-201ENST00000625124 226 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC025048.6-202ENST00000627667 438 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 C11orf57-209ENST00000532163 3739 ntTSL 2 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 DZANK1-204ENST00000358866 3310 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 CASC19-206ENST00000641028 1430 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AL133384.2-201ENST00000623755 2954 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 SAMMSON-203ENST00000641005 2168 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 TDG-202ENST00000392872 3251 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 EYA1-204ENST00000388741 3404 ntTSL 5 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 THAP12P8-201ENST00000447914 2115 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 Y_RNA.192-201ENST00000363977 102 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 GUSBP4-201ENST00000423899 672 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AL035458.1-201ENST00000433096 585 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AC007679.3-201ENST00000434035 414 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AC110602.1-201ENST00000437414 318 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AC002542.1-201ENST00000440683 193 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AL451074.4-201ENST00000447545 470 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 RN7SL70P-201ENST00000478322 302 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 VPS26AP1-201ENST00000483197 979 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AC079768.1-201ENST00000503181 711 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 HNRNPA1P44-201ENST00000503999 879 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 HSPE1P23-201ENST00000509838 286 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AC106800.2-201ENST00000514009 1103 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 MT1L-202ENST00000566367 78 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AC060780.3-201ENST00000589464 80 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms