Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 RPL5P12-201ENST00000477071 851 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC135999.1-201ENST00000478962 479 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC226119.2-201ENST00000513501 530 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AL158819.1-201ENST00000514681 398 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 RNU6-123P-201ENST00000516163 102 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC008514.1-201ENST00000521965 602 ntTSL 3 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 RPL10P9-201ENST00000522551 645 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 DEFB131D-201ENST00000526803 184 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC022880.2-201ENST00000532664 270 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 RTN4IP1-204ENST00000539449 814 ntTSL 2 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 STXBP6-206ENST00000548369 682 ntTSL 2 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC005479.1-201ENST00000554629 451 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 TRAV15-201ENST00000556680 249 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC100830.2-201ENST00000581636 240 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC018697.1-202ENST00000582650 592 ntTSL 4 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC008991.1-201ENST00000591285 537 ntTSL 4 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 HMGN2P46-208ENST00000598619 490 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 7SK.7-201ENST00000603504 247 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 SNRPGP17-201ENST00000603780 214 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 BNIP3P15-201ENST00000604600 301 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC215522.1-201ENST00000615488 446 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 RFPL3-AS1_1.1-201ENST00000617561 88 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC068831.8-201ENST00000620171 435 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC141557.2-201ENST00000621330 482 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC011389.3-201ENST00000623273 999 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AL132796.3-201ENST00000624703 900 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC119674.1-207ENST00000641355 633 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC124804.1-202ENST00000583712 4315 ntTSL 5 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 MTCO1P14-201ENST00000441695 1559 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 ANO2-201ENST00000327087 3720 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC116456.2-201ENST00000623018 2209 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 PPARG-207ENST00000397015 1722 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 CLUAP1-212ENST00000576634 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC061975.7-201ENST00000592016 2692 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 SOCS5P2-201ENST00000449637 1359 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 RAD17-219ENST00000521422 2323 ntTSL 5 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 HS3ST5-202ENST00000411826 2744 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 NMD3P1-201ENST00000439704 1488 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 CAB39-207ENST00000614925 1619 ntTSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 MAPK10-260ENST00000641047 2546 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 NXPE1-201ENST00000251921 1888 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 SMCO2-201ENST00000298876 1122 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 GAPDHP24-201ENST00000328713 983 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 SNORA55-201ENST00000364587 135 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 HPN-AS1-201ENST00000392227 1124 ntTSL 2 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 TMSB4XP8-201ENST00000402089 135 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 AL135903.1-201ENST00000402742 1590 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 AL356967.1-201ENST00000406305 431 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 SNRPGP11-201ENST00000411777 232 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 TMSB4XP6-201ENST00000415187 135 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 AL135905.1-201ENST00000416120 801 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 SMCO2-202ENST00000416383 1272 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 TEX41-204ENST00000423031 491 ntTSL 4 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 GAPDHP73-201ENST00000423411 1007 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 TMSB4XP1-201ENST00000424567 135 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms