Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 OR10R3P-201ENST00000361688 942 ntBASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 RN7SKP69-201ENST00000365390 305 ntBASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 RNA5SP211-201ENST00000365516 117 ntBASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 HMGB1P20-201ENST00000402555 677 ntBASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 AC113412.1-201ENST00000425840 504 ntBASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 AC073909.1-201ENST00000447112 999 ntBASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 FAM27E4-201ENST00000605259 342 ntBASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP2Q96SN8 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 U3.2-201ENST00000362981 210 ntBASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 RN7SKP81-201ENST00000365603 331 ntBASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 RPS4XP5-201ENST00000419038 768 ntBASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 AC090424.1-201ENST00000535243 736 ntBASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 MIR3176-201ENST00000582210 90 ntBASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 AC013244.1-201ENST00000604279 193 ntBASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 MAPK10-338ENST00000641647 3362 ntBASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 BRD7P6-201ENST00000431406 1860 ntBASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 AP002833.3-201ENST00000625075 2265 ntBASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP2Q96SN8 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 AL355433.1-201ENST00000422804 300 ntBASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 AC007568.1-201ENST00000422912 471 ntBASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 OR5W1P-201ENST00000423705 938 ntBASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 BX119321.1-201ENST00000428912 797 ntBASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 SEPT14P12-201ENST00000442280 560 ntBASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 PPIAP19-201ENST00000486414 492 ntBASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 PCNAP4-201ENST00000532690 730 ntBASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 AC004477.3-201ENST00000614061 590 ntBASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
CDK5RAP2Q96SN8 AC092070.2-203ENST00000598377 3644 ntBASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 MIR375-201ENST00000362103 64 ntBASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 AP003170.5-201ENST00000397185 335 ntBASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 AL391422.1-201ENST00000402155 436 ntBASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 AC091078.2-201ENST00000557145 559 ntBASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP2Q96SN8 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 515.3 ms