Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 GTF3AP1-201ENST00000416942 1004 ntBASIC6.27□□□□□ -1.4
SHROOM3Q8TF72 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.27□□□□□ -1.4
SHROOM3Q8TF72 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.27□□□□□ -1.4
SHROOM3Q8TF72 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
SHROOM3Q8TF72 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.27□□□□□ -1.4
SHROOM3Q8TF72 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.27□□□□□ -1.4
SHROOM3Q8TF72 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.27□□□□□ -1.4
SHROOM3Q8TF72 AC073916.1-201ENST00000545095 130 ntBASIC6.27□□□□□ -1.4
SHROOM3Q8TF72 AC005632.2-201ENST00000564271 828 ntBASIC6.27□□□□□ -1.4
SHROOM3Q8TF72 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.27□□□□□ -1.4
SHROOM3Q8TF72 AC004801.6-201ENST00000616571 978 ntBASIC6.27□□□□□ -1.4
SHROOM3Q8TF72 AL357153.4-201ENST00000620487 1016 ntBASIC6.27□□□□□ -1.4
SHROOM3Q8TF72 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.27□□□□□ -1.4
SHROOM3Q8TF72 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.27□□□□□ -1.4
SHROOM3Q8TF72 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 CR788268.1-201ENST00000603931 1809 ntBASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 MTCO1P28-201ENST00000574177 1528 ntBASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 AL355433.1-201ENST00000422804 300 ntBASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 RN7SKP35-201ENST00000517210 151 ntBASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 AC096708.4-201ENST00000620563 552 ntBASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 DNM1P47-203ENST00000571780 12667 ntBASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM3Q8TF72 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 MIR323A-201ENST00000362199 86 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 AL096800.1-201ENST00000405326 893 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 RN7SKP166-201ENST00000410812 305 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 HMGA1P8-201ENST00000414130 321 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 AC079922.1-201ENST00000443291 359 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 AC025458.1-201ENST00000506046 166 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 LINC00556-201ENST00000569603 412 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 FAM27E2-201ENST00000619668 403 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 AL117378.2-201ENST00000622916 1337 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 FO393409.1-201ENST00000399325 1372 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 OR7E25P-201ENST00000344844 931 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 AL359091.1-201ENST00000449048 1734 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 HIGD1AP16-201ENST00000450986 258 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 RPS27AP3-201ENST00000453803 454 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms