Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC005702.3-201ENST00000585345 1447 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 RN7SKP15-201ENST00000364742 309 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 GNG5P2-201ENST00000372054 207 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 MIR323B-201ENST00000385269 82 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AL929472.1-201ENST00000417484 429 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 RPL23AP85-201ENST00000421838 433 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC092651.1-201ENST00000426110 312 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AL121578.1-201ENST00000428051 892 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 HMGN1P2-201ENST00000445197 310 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 CR383656.1-201ENST00000484916 377 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AL162632.2-201ENST00000553933 399 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC090651.1-201ENST00000567865 634 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 SMIM12P1-201ENST00000603004 274 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC015982.1-201ENST00000608113 465 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC025262.3-201ENST00000623666 360 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AP001962.1-201ENST00000624114 559 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC009950.2-201ENST00000636548 183 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC027575.3-201ENST00000583058 2747 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AL121768.1-201ENST00000613917 2544 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AL355834.1-201ENST00000556602 3965 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 RN7SKP186-201ENST00000365371 303 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 MIR188-201ENST00000385034 86 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 RPL23AP17-201ENST00000401064 499 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 RPL5P20-201ENST00000403848 896 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 GCNT1P4-201ENST00000404096 329 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AC015977.1-201ENST00000418887 292 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AC099782.1-201ENST00000425889 474 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AC007679.3-201ENST00000434035 414 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AC110602.1-201ENST00000437414 318 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 GTF2IP14-201ENST00000441415 586 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 REG1CP-206ENST00000447469 496 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 NDUFA5P5-201ENST00000468361 342 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AL355032.1-201ENST00000472981 438 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AL035690.1-201ENST00000490892 383 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 RPL5P14-201ENST00000494197 878 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 RPL3P13-201ENST00000550415 216 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AC002310.3-201ENST00000569728 723 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AC004232.2-201ENST00000574245 821 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AC005726.4-201ENST00000582858 458 ntBASIC5.85□□□□□ -1.47
CCDC71Q8IV32 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC71Q8IV32 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms