Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 AL021877.2-201ENST00000624442 10684 ntBASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 AC023490.2-201ENST00000359859 470 ntBASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 RNA5SP500-201ENST00000364486 119 ntBASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 RNU6-316P-201ENST00000391027 107 ntBASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 AL512637.1-201ENST00000439523 1231 ntBASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 AL445466.1-201ENST00000448432 357 ntBASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 VN1R38P-201ENST00000450265 887 ntBASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 AC141002.1-201ENST00000607025 279 ntBASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHROOM1Q2M3G4 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AC112243.1-201ENST00000623949 3851 ntBASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AC092821.2-201ENST00000545710 2042 ntBASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 RN7SKP77-201ENST00000363261 353 ntBASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AC245060.4-201ENST00000413293 1121 ntBASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 TRGV5P-201ENST00000419915 354 ntBASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 NPM1P25-201ENST00000429734 854 ntBASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 HMGN1P36-201ENST00000446623 298 ntBASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 SCARNA18.1-201ENST00000516330 83 ntBASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 SNORD95-201ENST00000579879 68 ntBASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AC005244.1-201ENST00000582566 339 ntBASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 FAM72A-208ENST00000607379 1139 ntBASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AC126175.1-201ENST00000617041 758 ntBASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AC130448.2-201ENST00000624082 374 ntBASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
SHROOM1Q2M3G4 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SHROOM1Q2M3G4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.15□□□□□ -1.27
SHROOM1Q2M3G4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SHROOM1Q2M3G4 AP002370.1-201ENST00000528055 1602 ntBASIC7.15□□□□□ -1.27
SHROOM1Q2M3G4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SHROOM1Q2M3G4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SHROOM1Q2M3G4 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.15□□□□□ -1.27
SHROOM1Q2M3G4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms