Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.85□□□□□ -1.47
LTBQ06643 AC037479.1-201ENST00000558361 625 ntBASIC5.85□□□□□ -1.47
LTBQ06643 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.85□□□□□ -1.47
LTBQ06643 AC009303.3-201ENST00000591103 736 ntBASIC5.85□□□□□ -1.47
LTBQ06643 AC114477.1-201ENST00000605097 605 ntBASIC5.85□□□□□ -1.47
LTBQ06643 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.85□□□□□ -1.47
LTBQ06643 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.85□□□□□ -1.47
LTBQ06643 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.85□□□□□ -1.47
LTBQ06643 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LTBQ06643 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LTBQ06643 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.85□□□□□ -1.47
LTBQ06643 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LTBQ06643 AC009135.2-201ENST00000624136 1768 ntBASIC5.85□□□□□ -1.47
LTBQ06643 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
LTBQ06643 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LTBQ06643 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LTBQ06643 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.84□□□□□ -1.47
LTBQ06643 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
LTBQ06643 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.84□□□□□ -1.47
LTBQ06643 AC034229.2-201ENST00000566945 2508 ntBASIC5.84□□□□□ -1.47
LTBQ06643 AC011504.1-201ENST00000623331 4103 ntBASIC5.84□□□□□ -1.47
LTBQ06643 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LTBQ06643 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.84□□□□□ -1.47
LTBQ06643 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LTBQ06643 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LTBQ06643 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LTBQ06643 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LTBQ06643 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LTBQ06643 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LTBQ06643 AL390879.2-203ENST00000426943 1121 ntBASIC5.84□□□□□ -1.47
LTBQ06643 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.84□□□□□ -1.47
LTBQ06643 OR6R1P-201ENST00000431838 940 ntBASIC5.84□□□□□ -1.47
LTBQ06643 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.84□□□□□ -1.47
LTBQ06643 AL391987.1-201ENST00000441025 200 ntBASIC5.84□□□□□ -1.47
LTBQ06643 COL11A2P1-205ENST00000441798 676 ntBASIC5.84□□□□□ -1.47
LTBQ06643 AC009237.1-201ENST00000442127 744 ntBASIC5.84□□□□□ -1.47
LTBQ06643 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.84□□□□□ -1.47
LTBQ06643 AC022206.1-201ENST00000495947 347 ntBASIC5.84□□□□□ -1.47
LTBQ06643 AC091965.3-201ENST00000506236 208 ntBASIC5.84□□□□□ -1.47
LTBQ06643 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.84□□□□□ -1.47
LTBQ06643 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.84□□□□□ -1.47
LTBQ06643 SNX18P25-201ENST00000510539 758 ntBASIC5.84□□□□□ -1.47
LTBQ06643 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.84□□□□□ -1.47
LTBQ06643 HSD3BP3-201ENST00000514706 994 ntBASIC5.84□□□□□ -1.47
LTBQ06643 RN7SKP157-201ENST00000516174 282 ntBASIC5.84□□□□□ -1.47
LTBQ06643 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LTBQ06643 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.84□□□□□ -1.47
LTBQ06643 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
LTBQ06643 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
LTBQ06643 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.84□□□□□ -1.47
LTBQ06643 AC051619.2-201ENST00000559063 397 ntBASIC5.84□□□□□ -1.47
LTBQ06643 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.84□□□□□ -1.47
LTBQ06643 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.84□□□□□ -1.47
LTBQ06643 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.84□□□□□ -1.47
LTBQ06643 AL138895.2-201ENST00000603019 178 ntBASIC5.84□□□□□ -1.47
LTBQ06643 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.84□□□□□ -1.47
LTBQ06643 AC024255.1-201ENST00000614376 102 ntBASIC5.84□□□□□ -1.47
LTBQ06643 U1.41-201ENST00000617626 165 ntBASIC5.84□□□□□ -1.47
LTBQ06643 TCL6_3.1-201ENST00000619064 137 ntBASIC5.84□□□□□ -1.47
LTBQ06643 MIR6886-201ENST00000619864 61 ntBASIC5.84□□□□□ -1.47
LTBQ06643 AC106858.1-201ENST00000637497 429 ntBASIC5.84□□□□□ -1.47
LTBQ06643 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LTBQ06643 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.84□□□□□ -1.47
LTBQ06643 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
LTBQ06643 SAGE3P-201ENST00000619800 1635 ntBASIC5.84□□□□□ -1.47
LTBQ06643 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LTBQ06643 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.84□□□□□ -1.47
LTBQ06643 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
LTBQ06643 AC024341.1-201ENST00000526444 1552 ntBASIC5.84□□□□□ -1.48
LTBQ06643 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.48
LTBQ06643 MTCO1P11-201ENST00000429111 1528 ntBASIC5.84□□□□□ -1.48
LTBQ06643 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.83□□□□□ -1.48
LTBQ06643 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.83□□□□□ -1.48
LTBQ06643 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.83□□□□□ -1.48
LTBQ06643 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LTBQ06643 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LTBQ06643 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
LTBQ06643 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LTBQ06643 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.83□□□□□ -1.48
LTBQ06643 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LTBQ06643 AC011455.2-201ENST00000599320 3336 ntBASIC5.83□□□□□ -1.48
LTBQ06643 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LTBQ06643 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LTBQ06643 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LTBQ06643 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.83□□□□□ -1.48
LTBQ06643 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LTBQ06643 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LTBQ06643 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
LTBQ06643 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.83□□□□□ -1.48
LTBQ06643 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
LTBQ06643 OR11H13P-201ENST00000359695 979 ntBASIC5.83□□□□□ -1.48
LTBQ06643 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.83□□□□□ -1.48
LTBQ06643 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LTBQ06643 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.83□□□□□ -1.48
LTBQ06643 RBBP4P5-201ENST00000398583 1266 ntBASIC5.83□□□□□ -1.48
LTBQ06643 PSMA6P1-201ENST00000400275 741 ntBASIC5.83□□□□□ -1.48
LTBQ06643 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.83□□□□□ -1.48
LTBQ06643 AC244033.1-201ENST00000426826 870 ntBASIC5.83□□□□□ -1.48
LTBQ06643 MED28P4-201ENST00000433137 572 ntBASIC5.83□□□□□ -1.48
LTBQ06643 AC007679.3-201ENST00000434035 414 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms