Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VCPP55072 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.78□□□□□ -1.32
VCPP55072 AL022323.4-201ENST00000623980 13120 ntBASIC6.77□□□□□ -1.32
VCPP55072 AC110373.1-201ENST00000505994 3505 ntBASIC6.77□□□□□ -1.32
VCPP55072 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
VCPP55072 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.77□□□□□ -1.32
VCPP55072 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.77□□□□□ -1.33
VCPP55072 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
VCPP55072 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VCPP55072 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VCPP55072 SMG1P5-202ENST00000529428 4219 ntBASIC6.77□□□□□ -1.33
VCPP55072 SMG1P2-201ENST00000566127 4221 ntBASIC6.77□□□□□ -1.33
VCPP55072 AC139426.3-201ENST00000605648 2059 ntBASIC6.77□□□□□ -1.33
VCPP55072 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.77□□□□□ -1.33
VCPP55072 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VCPP55072 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.77□□□□□ -1.33
VCPP55072 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
VCPP55072 SNORA58B-201ENST00000364259 136 ntBASIC6.77□□□□□ -1.33
VCPP55072 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
VCPP55072 U3.25-201ENST00000391209 220 ntBASIC6.77□□□□□ -1.33
VCPP55072 RN7SKP108-201ENST00000411367 328 ntBASIC6.77□□□□□ -1.33
VCPP55072 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.77□□□□□ -1.33
VCPP55072 RPL7AP14-201ENST00000424041 802 ntBASIC6.77□□□□□ -1.33
VCPP55072 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.77□□□□□ -1.33
VCPP55072 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.77□□□□□ -1.33
VCPP55072 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.77□□□□□ -1.33
VCPP55072 SNX18P24-201ENST00000505249 671 ntBASIC6.77□□□□□ -1.33
VCPP55072 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.77□□□□□ -1.33
VCPP55072 SCARNA5-201ENST00000516201 276 ntBASIC6.77□□□□□ -1.33
VCPP55072 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.77□□□□□ -1.33
VCPP55072 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.77□□□□□ -1.33
VCPP55072 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VCPP55072 AL162632.2-201ENST00000553933 399 ntBASIC6.77□□□□□ -1.33
VCPP55072 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.77□□□□□ -1.33
VCPP55072 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.77□□□□□ -1.33
VCPP55072 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.77□□□□□ -1.33
VCPP55072 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
VCPP55072 U1.41-201ENST00000617626 165 ntBASIC6.77□□□□□ -1.33
VCPP55072 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.77□□□□□ -1.33
VCPP55072 MIR6730-201ENST00000622213 67 ntBASIC6.77□□□□□ -1.33
VCPP55072 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
VCPP55072 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
VCPP55072 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
VCPP55072 AC011504.1-201ENST00000623331 4103 ntBASIC6.77□□□□□ -1.33
VCPP55072 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VCPP55072 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
VCPP55072 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.77□□□□□ -1.33
VCPP55072 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VCPP55072 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VCPP55072 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VCPP55072 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VCPP55072 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
VCPP55072 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.76□□□□□ -1.33
VCPP55072 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.76□□□□□ -1.33
VCPP55072 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
VCPP55072 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.76□□□□□ -1.33
VCPP55072 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VCPP55072 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.76□□□□□ -1.33
VCPP55072 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VCPP55072 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VCPP55072 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.76□□□□□ -1.33
VCPP55072 FUNDC2P3-201ENST00000334716 533 ntBASIC6.76□□□□□ -1.33
VCPP55072 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
VCPP55072 MRPS6P2-201ENST00000381143 370 ntBASIC6.76□□□□□ -1.33
VCPP55072 AP003170.5-201ENST00000397185 335 ntBASIC6.76□□□□□ -1.33
VCPP55072 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.76□□□□□ -1.33
VCPP55072 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.76□□□□□ -1.33
VCPP55072 RN7SKP286-201ENST00000410894 299 ntBASIC6.76□□□□□ -1.33
VCPP55072 AC002127.1-201ENST00000421305 225 ntBASIC6.76□□□□□ -1.33
VCPP55072 AC083862.1-201ENST00000427378 1242 ntBASIC6.76□□□□□ -1.33
VCPP55072 RPL6P30-201ENST00000443382 862 ntBASIC6.76□□□□□ -1.33
VCPP55072 PPIAP27-201ENST00000453800 265 ntBASIC6.76□□□□□ -1.33
VCPP55072 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VCPP55072 RN7SL515P-201ENST00000463999 297 ntBASIC6.76□□□□□ -1.33
VCPP55072 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.76□□□□□ -1.33
VCPP55072 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.76□□□□□ -1.33
VCPP55072 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.76□□□□□ -1.33
VCPP55072 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.76□□□□□ -1.33
VCPP55072 AP005639.1-201ENST00000526939 192 ntBASIC6.76□□□□□ -1.33
VCPP55072 AC073916.1-201ENST00000545095 130 ntBASIC6.76□□□□□ -1.33
VCPP55072 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.76□□□□□ -1.33
VCPP55072 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.76□□□□□ -1.33
VCPP55072 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.76□□□□□ -1.33
VCPP55072 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.76□□□□□ -1.33
VCPP55072 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.76□□□□□ -1.33
VCPP55072 AP001264.1-201ENST00000620602 703 ntBASIC6.76□□□□□ -1.33
VCPP55072 AC004836.1-201ENST00000623032 634 ntBASIC6.76□□□□□ -1.33
VCPP55072 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.76□□□□□ -1.33
VCPP55072 AL049767.1-202ENST00000637826 242 ntBASIC6.76□□□□□ -1.33
VCPP55072 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.76□□□□□ -1.33
VCPP55072 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VCPP55072 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.76□□□□□ -1.33
VCPP55072 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
VCPP55072 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.76□□□□□ -1.33
VCPP55072 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
VCPP55072 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.76□□□□□ -1.33
VCPP55072 MTCO1P28-201ENST00000574177 1528 ntBASIC6.76□□□□□ -1.33
VCPP55072 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
VCPP55072 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VCPP55072 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms