Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR132-201ENST00000591554 101 ntBASIC6.8□□□□□ -1.32
COPB1P53618 DYNLL1P1-201ENST00000595442 269 ntBASIC6.8□□□□□ -1.32
COPB1P53618 AC091167.5-201ENST00000605689 894 ntBASIC6.8□□□□□ -1.32
COPB1P53618 AL589743.6-201ENST00000611025 117 ntBASIC6.8□□□□□ -1.32
COPB1P53618 AL137067.2-201ENST00000621202 131 ntBASIC6.8□□□□□ -1.32
COPB1P53618 AC021422.1-201ENST00000621212 473 ntBASIC6.8□□□□□ -1.32
COPB1P53618 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.8□□□□□ -1.32
COPB1P53618 AC091948.2-201ENST00000636510 279 ntBASIC6.8□□□□□ -1.32
COPB1P53618 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.8□□□□□ -1.32
COPB1P53618 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.8□□□□□ -1.32
COPB1P53618 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COPB1P53618 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.8□□□□□ -1.32
COPB1P53618 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COPB1P53618 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COPB1P53618 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COPB1P53618 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.8□□□□□ -1.32
COPB1P53618 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.8□□□□□ -1.32
COPB1P53618 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COPB1P53618 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COPB1P53618 AL359091.1-201ENST00000449048 1734 ntBASIC6.79□□□□□ -1.32
COPB1P53618 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COPB1P53618 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COPB1P53618 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
COPB1P53618 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.79□□□□□ -1.32
COPB1P53618 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COPB1P53618 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COPB1P53618 FUNDC2P3-201ENST00000334716 533 ntBASIC6.79□□□□□ -1.32
COPB1P53618 RN7SKP77-201ENST00000363261 353 ntBASIC6.79□□□□□ -1.32
COPB1P53618 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.79□□□□□ -1.32
COPB1P53618 AL033519.1-201ENST00000407266 307 ntBASIC6.79□□□□□ -1.32
COPB1P53618 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.79□□□□□ -1.32
COPB1P53618 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.79□□□□□ -1.32
COPB1P53618 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.79□□□□□ -1.32
COPB1P53618 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.79□□□□□ -1.32
COPB1P53618 AL731534.1-201ENST00000434711 269 ntBASIC6.79□□□□□ -1.32
COPB1P53618 RPEP4-201ENST00000437636 602 ntBASIC6.79□□□□□ -1.32
COPB1P53618 AL390879.1-201ENST00000439143 386 ntBASIC6.79□□□□□ -1.32
COPB1P53618 AC234771.4-201ENST00000441416 730 ntBASIC6.79□□□□□ -1.32
COPB1P53618 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COPB1P53618 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.79□□□□□ -1.32
COPB1P53618 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.79□□□□□ -1.32
COPB1P53618 AC063955.1-201ENST00000462872 685 ntBASIC6.79□□□□□ -1.32
COPB1P53618 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.79□□□□□ -1.32
COPB1P53618 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.79□□□□□ -1.32
COPB1P53618 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COPB1P53618 BTG1P1-201ENST00000540396 508 ntBASIC6.79□□□□□ -1.32
COPB1P53618 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.79□□□□□ -1.32
COPB1P53618 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.79□□□□□ -1.32
COPB1P53618 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COPB1P53618 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.79□□□□□ -1.32
COPB1P53618 RNU4ATAC-201ENST00000580972 127 ntBASIC6.79□□□□□ -1.32
COPB1P53618 AL591167.1-201ENST00000607321 456 ntBASIC6.79□□□□□ -1.32
COPB1P53618 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.79□□□□□ -1.32
COPB1P53618 HPVC1-201ENST00000629899 1198 ntBASIC6.79□□□□□ -1.32
COPB1P53618 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.79□□□□□ -1.32
COPB1P53618 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COPB1P53618 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.79□□□□□ -1.32
COPB1P53618 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COPB1P53618 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COPB1P53618 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COPB1P53618 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
COPB1P53618 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
COPB1P53618 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COPB1P53618 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COPB1P53618 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.78□□□□□ -1.32
COPB1P53618 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
COPB1P53618 CCAT2-201ENST00000630920 1752 ntBASIC6.78□□□□□ -1.32
COPB1P53618 OR6K3-202ENST00000368146 996 ntBASIC6.78□□□□□ -1.32
COPB1P53618 MIR191-201ENST00000384873 92 ntBASIC6.78□□□□□ -1.32
COPB1P53618 AL096800.1-201ENST00000405326 893 ntBASIC6.78□□□□□ -1.32
COPB1P53618 RN7SKP121-201ENST00000410842 305 ntBASIC6.78□□□□□ -1.32
COPB1P53618 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COPB1P53618 DHFRP2-201ENST00000414224 547 ntBASIC6.78□□□□□ -1.32
COPB1P53618 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.78□□□□□ -1.32
COPB1P53618 AC002127.1-201ENST00000421305 225 ntBASIC6.78□□□□□ -1.32
COPB1P53618 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.78□□□□□ -1.32
COPB1P53618 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COPB1P53618 GTF3AP6-201ENST00000432585 986 ntBASIC6.78□□□□□ -1.32
COPB1P53618 AL365220.1-201ENST00000432923 399 ntBASIC6.78□□□□□ -1.32
COPB1P53618 PCNPP2-201ENST00000441651 455 ntBASIC6.78□□□□□ -1.32
COPB1P53618 GAPDHP23-201ENST00000444823 993 ntBASIC6.78□□□□□ -1.32
COPB1P53618 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.78□□□□□ -1.32
COPB1P53618 RPL31P11-202ENST00000454082 372 ntBASIC6.78□□□□□ -1.32
COPB1P53618 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.78□□□□□ -1.32
COPB1P53618 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.78□□□□□ -1.32
COPB1P53618 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.78□□□□□ -1.32
COPB1P53618 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.78□□□□□ -1.32
COPB1P53618 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.78□□□□□ -1.32
COPB1P53618 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.78□□□□□ -1.32
COPB1P53618 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.78□□□□□ -1.32
COPB1P53618 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.78□□□□□ -1.32
COPB1P53618 AC026688.1-201ENST00000520639 1168 ntBASIC6.78□□□□□ -1.32
COPB1P53618 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.78□□□□□ -1.32
COPB1P53618 AC110056.1-201ENST00000525759 911 ntBASIC6.78□□□□□ -1.32
COPB1P53618 AP001858.2-201ENST00000536213 601 ntBASIC6.78□□□□□ -1.32
COPB1P53618 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.78□□□□□ -1.32
COPB1P53618 AC008055.1-201ENST00000547032 609 ntBASIC6.78□□□□□ -1.32
COPB1P53618 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.78□□□□□ -1.32
COPB1P53618 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COPB1P53618 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms