Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDX1P52945 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.09□□□□□ -1.43
PDX1P52945 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDX1P52945 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.09□□□□□ -1.43
PDX1P52945 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDX1P52945 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDX1P52945 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDX1P52945 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDX1P52945 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.08□□□□□ -1.44
PDX1P52945 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDX1P52945 CUBNP3-201ENST00000457461 1784 ntBASIC6.08□□□□□ -1.44
PDX1P52945 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDX1P52945 AC010624.4-201ENST00000597606 1351 ntBASIC6.08□□□□□ -1.44
PDX1P52945 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PDX1P52945 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.08□□□□□ -1.44
PDX1P52945 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDX1P52945 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.08□□□□□ -1.44
PDX1P52945 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDX1P52945 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.08□□□□□ -1.44
PDX1P52945 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDX1P52945 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDX1P52945 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDX1P52945 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDX1P52945 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDX1P52945 FAM32BP-201ENST00000344033 333 ntBASIC6.08□□□□□ -1.44
PDX1P52945 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.08□□□□□ -1.44
PDX1P52945 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.08□□□□□ -1.44
PDX1P52945 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.08□□□□□ -1.44
PDX1P52945 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.08□□□□□ -1.44
PDX1P52945 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.08□□□□□ -1.44
PDX1P52945 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.08□□□□□ -1.44
PDX1P52945 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.08□□□□□ -1.44
PDX1P52945 AC093719.1-201ENST00000480427 441 ntBASIC6.08□□□□□ -1.44
PDX1P52945 RNU6-751P-201ENST00000516382 101 ntBASIC6.08□□□□□ -1.44
PDX1P52945 RN7SKP238-201ENST00000516483 249 ntBASIC6.08□□□□□ -1.44
PDX1P52945 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.08□□□□□ -1.44
PDX1P52945 AC008676.3-201ENST00000521237 435 ntBASIC6.08□□□□□ -1.44
PDX1P52945 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.08□□□□□ -1.44
PDX1P52945 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDX1P52945 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.08□□□□□ -1.44
PDX1P52945 AC068305.2-201ENST00000550567 1205 ntBASIC6.08□□□□□ -1.44
PDX1P52945 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.08□□□□□ -1.44
PDX1P52945 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDX1P52945 AC005332.4-201ENST00000592752 579 ntBASIC6.08□□□□□ -1.44
PDX1P52945 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.08□□□□□ -1.44
PDX1P52945 AC073333.2-201ENST00000603589 769 ntBASIC6.08□□□□□ -1.44
PDX1P52945 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.08□□□□□ -1.44
PDX1P52945 AL512652.1-201ENST00000619006 500 ntBASIC6.08□□□□□ -1.44
PDX1P52945 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.08□□□□□ -1.44
PDX1P52945 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.08□□□□□ -1.44
PDX1P52945 AC012254.5-201ENST00000623573 478 ntBASIC6.08□□□□□ -1.44
PDX1P52945 MIR4302-201ENST00000638058 60 ntBASIC6.08□□□□□ -1.44
PDX1P52945 MTCO1P28-201ENST00000574177 1528 ntBASIC6.08□□□□□ -1.44
PDX1P52945 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.08□□□□□ -1.44
PDX1P52945 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDX1P52945 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
PDX1P52945 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.08□□□□□ -1.44
PDX1P52945 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDX1P52945 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.08□□□□□ -1.44
PDX1P52945 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.08□□□□□ -1.44
PDX1P52945 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDX1P52945 AC105749.1-201ENST00000631338 2008 ntBASIC6.08□□□□□ -1.44
PDX1P52945 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
PDX1P52945 AC125238.2-201ENST00000430003 1440 ntBASIC6.08□□□□□ -1.44
PDX1P52945 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PDX1P52945 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PDX1P52945 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDX1P52945 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.07□□□□□ -1.44
PDX1P52945 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.07□□□□□ -1.44
PDX1P52945 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.07□□□□□ -1.44
PDX1P52945 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDX1P52945 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDX1P52945 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PDX1P52945 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDX1P52945 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.07□□□□□ -1.44
PDX1P52945 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.07□□□□□ -1.44
PDX1P52945 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDX1P52945 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.07□□□□□ -1.44
PDX1P52945 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDX1P52945 SUGT1P2-201ENST00000379452 992 ntBASIC6.07□□□□□ -1.44
PDX1P52945 RN7SKP121-201ENST00000410842 305 ntBASIC6.07□□□□□ -1.44
PDX1P52945 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDX1P52945 NPM1P36-201ENST00000415681 835 ntBASIC6.07□□□□□ -1.44
PDX1P52945 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.07□□□□□ -1.44
PDX1P52945 CYCSP52-201ENST00000422857 310 ntBASIC6.07□□□□□ -1.44
PDX1P52945 AL353662.1-201ENST00000439099 327 ntBASIC6.07□□□□□ -1.44
PDX1P52945 ATP5LP2-201ENST00000440646 311 ntBASIC6.07□□□□□ -1.44
PDX1P52945 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.07□□□□□ -1.44
PDX1P52945 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PDX1P52945 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.07□□□□□ -1.44
PDX1P52945 AC106872.4-201ENST00000510050 523 ntBASIC6.07□□□□□ -1.44
PDX1P52945 MTATP6P1-201ENST00000514057 681 ntBASIC6.07□□□□□ -1.44
PDX1P52945 KCTD9P4-201ENST00000526766 1166 ntBASIC6.07□□□□□ -1.44
PDX1P52945 AC027667.1-201ENST00000545814 304 ntBASIC6.07□□□□□ -1.44
PDX1P52945 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.07□□□□□ -1.44
PDX1P52945 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDX1P52945 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.07□□□□□ -1.44
PDX1P52945 AL683813.2-201ENST00000605245 502 ntBASIC6.07□□□□□ -1.44
PDX1P52945 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.07□□□□□ -1.44
PDX1P52945 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms