Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC092692.1-201ENST00000623625 2595 ntBASIC6.36□□□□□ -1.39
HTTP42858 AOX3P-204ENST00000491025 2107 ntBASIC6.36□□□□□ -1.39
HTTP42858 AC132825.1-201ENST00000463573 2247 ntBASIC6.35□□□□□ -1.39
HTTP42858 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 PDE11A-201ENST00000286063 9275 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.35□□□□□ -1.39
HTTP42858 AC245028.1-201ENST00000423259 256 ntBASIC6.35□□□□□ -1.39
HTTP42858 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.35□□□□□ -1.39
HTTP42858 AC092106.1-201ENST00000444291 373 ntBASIC6.35□□□□□ -1.39
HTTP42858 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 RN7SL165P-201ENST00000477476 291 ntBASIC6.35□□□□□ -1.39
HTTP42858 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.35□□□□□ -1.39
HTTP42858 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.35□□□□□ -1.39
HTTP42858 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.35□□□□□ -1.39
HTTP42858 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.35□□□□□ -1.39
HTTP42858 AL355974.3-201ENST00000617383 467 ntBASIC6.35□□□□□ -1.39
HTTP42858 AL450226.2-201ENST00000622913 439 ntBASIC6.35□□□□□ -1.39
HTTP42858 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
HTTP42858 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 PANDAR-201ENST00000629595 1506 ntBASIC6.35□□□□□ -1.39
HTTP42858 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.35□□□□□ -1.39
HTTP42858 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 MIR130A-201ENST00000385274 89 ntBASIC6.35□□□□□ -1.39
HTTP42858 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.35□□□□□ -1.39
HTTP42858 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.35□□□□□ -1.39
HTTP42858 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.35□□□□□ -1.39
HTTP42858 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.35□□□□□ -1.39
HTTP42858 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.35□□□□□ -1.39
HTTP42858 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.35□□□□□ -1.39
HTTP42858 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.35□□□□□ -1.39
HTTP42858 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.35□□□□□ -1.39
HTTP42858 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 AC016717.3-201ENST00000624730 554 ntBASIC6.35□□□□□ -1.39
HTTP42858 CASC19-221ENST00000641309 1382 ntBASIC6.35□□□□□ -1.39
HTTP42858 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
HTTP42858 OR55B1P-203ENST00000641518 2602 ntBASIC6.35□□□□□ -1.39
HTTP42858 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.35□□□□□ -1.39
HTTP42858 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.35□□□□□ -1.39
HTTP42858 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HTTP42858 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HTTP42858 AC092821.3-202ENST00000641304 2767 ntBASIC6.35□□□□□ -1.39
HTTP42858 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HTTP42858 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HTTP42858 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HTTP42858 AC019050.1-201ENST00000418508 492 ntBASIC6.34□□□□□ -1.39
HTTP42858 AC007537.2-201ENST00000472093 511 ntBASIC6.34□□□□□ -1.39
HTTP42858 AC136624.4-201ENST00000573044 370 ntBASIC6.34□□□□□ -1.39
HTTP42858 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.34□□□□□ -1.39
HTTP42858 AL591848.4-201ENST00000567832 3472 ntBASIC6.34□□□□□ -1.39
HTTP42858 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HTTP42858 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
HTTP42858 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
HTTP42858 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HTTP42858 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.34□□□□□ -1.39
HTTP42858 OR52B5P-204ENST00000641744 3467 ntBASIC6.34□□□□□ -1.39
HTTP42858 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
HTTP42858 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.34□□□□□ -1.39
HTTP42858 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.34□□□□□ -1.39
HTTP42858 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HTTP42858 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HTTP42858 ELP4-218ENST00000639570 5795 ntTSL 5 BASIC6.34□□□□□ -1.39
HTTP42858 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.34□□□□□ -1.39
HTTP42858 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HTTP42858 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HTTP42858 EMP1-201ENST00000256951 5921 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HTTP42858 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HTTP42858 OR5M2P-202ENST00000641241 4242 ntBASIC6.34□□□□□ -1.39
HTTP42858 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HTTP42858 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
HTTP42858 GLULP6-201ENST00000399502 913 ntBASIC6.34□□□□□ -1.4
HTTP42858 P2RY10P2-201ENST00000416730 913 ntBASIC6.34□□□□□ -1.4
HTTP42858 PRPF38AP2-201ENST00000438179 851 ntBASIC6.34□□□□□ -1.4
HTTP42858 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
HTTP42858 NDUFA5P9-201ENST00000472609 340 ntBASIC6.34□□□□□ -1.4
HTTP42858 AC068587.1-201ENST00000483613 781 ntBASIC6.34□□□□□ -1.4
HTTP42858 AC093799.2-201ENST00000610062 578 ntBASIC6.34□□□□□ -1.4
HTTP42858 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HTTP42858 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
HTTP42858 ZNF101P1-201ENST00000435701 1720 ntBASIC6.34□□□□□ -1.4
HTTP42858 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
HTTP42858 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HTTP42858 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HTTP42858 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HTTP42858 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC6.33□□□□□ -1.4
HTTP42858 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.33□□□□□ -1.4
HTTP42858 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.33□□□□□ -1.4
HTTP42858 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.33□□□□□ -1.4
HTTP42858 ZFYVE26-207ENST00000555452 7309 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms