Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HNF4AP41235 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HNF4AP41235 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.14□□□□□ -1.43
HNF4AP41235 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.14□□□□□ -1.43
HNF4AP41235 AC003045.1-201ENST00000398779 713 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 RN7SKP129-201ENST00000410288 299 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 RNA5SP115-201ENST00000411160 107 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 RNU2-22P-201ENST00000411266 212 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 AC116036.1-201ENST00000412199 367 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.14□□□□□ -1.43
HNF4AP41235 MRPS21P5-201ENST00000417885 231 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 DPPA2P2-201ENST00000418220 897 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.14□□□□□ -1.43
HNF4AP41235 GPN3P1-201ENST00000423883 535 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 GAPDHP19-201ENST00000431768 1005 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 GTF3AP6-201ENST00000432585 986 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 AC064862.5-201ENST00000440618 334 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.14□□□□□ -1.43
HNF4AP41235 AL022237.1-201ENST00000446663 358 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 COX4I1P2-201ENST00000447446 547 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 AC099670.1-201ENST00000455141 783 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.14□□□□□ -1.43
HNF4AP41235 AC019084.1-201ENST00000457337 432 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 RN7SL393P-201ENST00000463588 296 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HNF4AP41235 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HNF4AP41235 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.14□□□□□ -1.43
HNF4AP41235 AC010343.2-201ENST00000510162 224 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.14□□□□□ -1.43
HNF4AP41235 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.14□□□□□ -1.43
HNF4AP41235 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.14□□□□□ -1.43
HNF4AP41235 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.14□□□□□ -1.43
HNF4AP41235 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.14□□□□□ -1.43
HNF4AP41235 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.14□□□□□ -1.43
HNF4AP41235 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.14□□□□□ -1.43
HNF4AP41235 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.14□□□□□ -1.43
HNF4AP41235 AC073046.2-201ENST00000604756 527 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 AC089999.3-201ENST00000622440 577 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.14□□□□□ -1.43
HNF4AP41235 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HNF4AP41235 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.14□□□□□ -1.43
HNF4AP41235 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HNF4AP41235 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.14□□□□□ -1.43
HNF4AP41235 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HNF4AP41235 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.14□□□□□ -1.43
HNF4AP41235 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HNF4AP41235 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HNF4AP41235 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.14□□□□□ -1.43
HNF4AP41235 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HNF4AP41235 AC093297.3-201ENST00000607056 2517 ntBASIC6.14□□□□□ -1.43
HNF4AP41235 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
HNF4AP41235 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HNF4AP41235 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HNF4AP41235 AC007342.5-201ENST00000571340 2142 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.13□□□□□ -1.43
HNF4AP41235 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HNF4AP41235 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
HNF4AP41235 RN7SKP184-201ENST00000362348 333 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HNF4AP41235 YWHAZP4-201ENST00000392459 708 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 AL034417.1-201ENST00000399343 800 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 VIM2P-201ENST00000402383 1294 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.13□□□□□ -1.43
HNF4AP41235 HMGA1P8-201ENST00000414130 321 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
HNF4AP41235 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.13□□□□□ -1.43
HNF4AP41235 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.13□□□□□ -1.43
HNF4AP41235 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.13□□□□□ -1.43
HNF4AP41235 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.13□□□□□ -1.43
HNF4AP41235 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.13□□□□□ -1.43
HNF4AP41235 GTF2IP14-201ENST00000441415 586 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 RPS18P1-201ENST00000447840 458 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 AC092967.1-201ENST00000449016 481 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 CEACAMP11-201ENST00000455211 583 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 AC004890.1-201ENST00000461005 181 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 RN7SL39P-201ENST00000462264 297 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 AC044810.1-201ENST00000480271 711 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 AC098583.1-201ENST00000480875 255 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.13□□□□□ -1.43
HNF4AP41235 NACAP5-201ENST00000509863 636 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.13□□□□□ -1.43
HNF4AP41235 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HNF4AP41235 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.13□□□□□ -1.43
HNF4AP41235 RNA5SP418-201ENST00000515951 117 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.13□□□□□ -1.43
HNF4AP41235 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.13□□□□□ -1.43
HNF4AP41235 MIR4420-201ENST00000583944 77 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.13□□□□□ -1.43
HNF4AP41235 AC063977.7-201ENST00000594454 337 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.13□□□□□ -1.43
HNF4AP41235 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HNF4AP41235 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.13□□□□□ -1.43
HNF4AP41235 SNORA74.4-201ENST00000607595 199 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.13□□□□□ -1.43
HNF4AP41235 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 HTR1DP1-201ENST00000616500 888 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 MIR6823-201ENST00000622118 61 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 AC022726.2-201ENST00000634673 547 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HNF4AP41235 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms