Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.78□□□□□ -1.16
COL15A1P39059 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.78□□□□□ -1.16
COL15A1P39059 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.78□□□□□ -1.16
COL15A1P39059 AP005639.1-201ENST00000526939 192 ntBASIC7.78□□□□□ -1.16
COL15A1P39059 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.78□□□□□ -1.16
COL15A1P39059 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.78□□□□□ -1.16
COL15A1P39059 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.78□□□□□ -1.16
COL15A1P39059 OR7E18P-201ENST00000592589 702 ntBASIC7.78□□□□□ -1.16
COL15A1P39059 AC013244.1-201ENST00000604279 193 ntBASIC7.78□□□□□ -1.16
COL15A1P39059 AC024255.1-201ENST00000614376 102 ntBASIC7.78□□□□□ -1.16
COL15A1P39059 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
COL15A1P39059 CFTRP2-201ENST00000634304 199 ntBASIC7.78□□□□□ -1.16
COL15A1P39059 AC022726.2-201ENST00000634673 547 ntBASIC7.78□□□□□ -1.16
COL15A1P39059 AC116667.2-201ENST00000641075 823 ntBASIC7.78□□□□□ -1.16
COL15A1P39059 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
COL15A1P39059 PABPC1P8-201ENST00000452851 2086 ntBASIC7.78□□□□□ -1.16
COL15A1P39059 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL15A1P39059 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL15A1P39059 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL15A1P39059 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.77□□□□□ -1.16
COL15A1P39059 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL15A1P39059 NEPNP-201ENST00000404786 1371 ntBASIC7.77□□□□□ -1.17
COL15A1P39059 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL15A1P39059 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL15A1P39059 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.77□□□□□ -1.17
COL15A1P39059 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL15A1P39059 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
COL15A1P39059 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
COL15A1P39059 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
COL15A1P39059 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
COL15A1P39059 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.77□□□□□ -1.17
COL15A1P39059 SDHDP6-201ENST00000414693 480 ntBASIC7.77□□□□□ -1.17
COL15A1P39059 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.77□□□□□ -1.17
COL15A1P39059 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.77□□□□□ -1.17
COL15A1P39059 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.77□□□□□ -1.17
COL15A1P39059 MTND4LP12-201ENST00000448237 295 ntBASIC7.77□□□□□ -1.17
COL15A1P39059 RN7SL269P-201ENST00000467795 305 ntBASIC7.77□□□□□ -1.17
COL15A1P39059 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.77□□□□□ -1.17
COL15A1P39059 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.77□□□□□ -1.17
COL15A1P39059 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.77□□□□□ -1.17
COL15A1P39059 WBP1LP3-201ENST00000523033 208 ntBASIC7.77□□□□□ -1.17
COL15A1P39059 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL15A1P39059 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.77□□□□□ -1.17
COL15A1P39059 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.77□□□□□ -1.17
COL15A1P39059 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.77□□□□□ -1.17
COL15A1P39059 CYCSP1-201ENST00000604815 315 ntBASIC7.77□□□□□ -1.17
COL15A1P39059 AL034374.2-201ENST00000605281 548 ntBASIC7.77□□□□□ -1.17
COL15A1P39059 AL136131.3-201ENST00000607600 188 ntBASIC7.77□□□□□ -1.17
COL15A1P39059 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL15A1P39059 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL15A1P39059 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL15A1P39059 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.77□□□□□ -1.17
COL15A1P39059 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL15A1P39059 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.77□□□□□ -1.17
COL15A1P39059 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL15A1P39059 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.77□□□□□ -1.17
COL15A1P39059 GNL2P1-201ENST00000451274 2190 ntBASIC7.77□□□□□ -1.17
COL15A1P39059 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
COL15A1P39059 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL15A1P39059 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL15A1P39059 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL15A1P39059 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL15A1P39059 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC7.77□□□□□ -1.17
COL15A1P39059 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL15A1P39059 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL15A1P39059 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL15A1P39059 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL15A1P39059 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL15A1P39059 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
COL15A1P39059 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL15A1P39059 MIR143-201ENST00000385300 106 ntBASIC7.76□□□□□ -1.17
COL15A1P39059 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
COL15A1P39059 AL022237.1-201ENST00000446663 358 ntBASIC7.76□□□□□ -1.17
COL15A1P39059 AC008638.1-201ENST00000506035 866 ntBASIC7.76□□□□□ -1.17
COL15A1P39059 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL15A1P39059 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC7.76□□□□□ -1.17
COL15A1P39059 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.76□□□□□ -1.17
COL15A1P39059 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.76□□□□□ -1.17
COL15A1P39059 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.76□□□□□ -1.17
COL15A1P39059 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.76□□□□□ -1.17
COL15A1P39059 AC024589.2-201ENST00000605642 1294 ntBASIC7.76□□□□□ -1.17
COL15A1P39059 AC020763.5-201ENST00000623298 430 ntBASIC7.76□□□□□ -1.17
COL15A1P39059 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.76□□□□□ -1.17
COL15A1P39059 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL15A1P39059 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
COL15A1P39059 AC011815.2-201ENST00000618230 2021 ntBASIC7.76□□□□□ -1.17
COL15A1P39059 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.76□□□□□ -1.17
COL15A1P39059 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
COL15A1P39059 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL15A1P39059 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.76□□□□□ -1.17
COL15A1P39059 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL15A1P39059 AC012254.3-201ENST00000591183 2117 ntBASIC7.76□□□□□ -1.17
COL15A1P39059 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.75□□□□□ -1.17
COL15A1P39059 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
COL15A1P39059 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
COL15A1P39059 OR7E101P-201ENST00000400428 513 ntBASIC7.75□□□□□ -1.17
COL15A1P39059 MIR1178-201ENST00000408396 91 ntBASIC7.75□□□□□ -1.17
COL15A1P39059 AL096829.1-201ENST00000413677 457 ntBASIC7.75□□□□□ -1.17
COL15A1P39059 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.75□□□□□ -1.17
COL15A1P39059 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms