Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 OR9K2-201ENST00000305377 1122 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 RNU1-87P-201ENST00000363727 170 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 RNU4-4P-201ENST00000364588 130 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC12P31275 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HOXC12P31275 RNA5SP105-201ENST00000391123 113 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 AL034403.1-201ENST00000399414 885 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 MRPL32P1-201ENST00000406301 247 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 GAS8-AS1-201ENST00000408886 435 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 AC096537.2-201ENST00000413707 714 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC12P31275 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.61□□□□□ -1.35
HOXC12P31275 TAF13P2-201ENST00000416876 286 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 LINC01347-201ENST00000417964 355 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 TNPO1P1-201ENST00000423641 1138 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC12P31275 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC12P31275 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC12P31275 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC12P31275 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC12P31275 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC12P31275 GTF2IP14-201ENST00000441415 586 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC12P31275 AC010240.2-201ENST00000445363 1205 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC12P31275 RPS27AP8-201ENST00000452665 445 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC12P31275 AC013787.1-201ENST00000460165 307 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 WBP1LP1-201ENST00000460451 896 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.61□□□□□ -1.35
HOXC12P31275 RPL34P34-201ENST00000465389 354 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC12P31275 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.61□□□□□ -1.35
HOXC12P31275 MRPS5P3-201ENST00000515577 166 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 RNU6-1308P-201ENST00000516817 103 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.61□□□□□ -1.35
HOXC12P31275 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
HOXC12P31275 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC12P31275 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC12P31275 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC12P31275 MTCO3P15-201ENST00000526563 574 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC12P31275 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC6.61□□□□□ -1.35
HOXC12P31275 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC12P31275 DPRXP4-201ENST00000578053 568 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 AP001094.1-201ENST00000579805 193 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 MIR4433B-201ENST00000581329 102 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC12P31275 AC022069.1-201ENST00000582910 658 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 AC007136.1-201ENST00000589141 199 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC12P31275 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HOXC12P31275 AC093909.6-201ENST00000624757 775 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC12P31275 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC12P31275 FGL2-202ENST00000637771 989 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HOXC12P31275 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HOXC12P31275 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HOXC12P31275 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HOXC12P31275 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC12P31275 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC12P31275 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC12P31275 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC090132.1-201ENST00000524071 1480 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC12P31275 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC12P31275 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC12P31275 EEF1A1P4-201ENST00000359165 1405 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC12P31275 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC12P31275 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC12P31275 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC12P31275 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC12P31275 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC12P31275 NACA3P-201ENST00000359690 648 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 Y_RNA.51-201ENST00000362725 102 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC12P31275 RPL5P8-201ENST00000396820 815 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 RPL23AP59-201ENST00000399415 461 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 U3.31-201ENST00000408113 216 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC12P31275 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.6□□□□□ -1.35
HOXC12P31275 RNU6-648P-201ENST00000410190 107 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms