Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC024587.1-201ENST00000505925 2157 ntBASIC6.72□□□□□ -1.33
HOXC8P31273 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXC8P31273 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXC8P31273 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC8P31273 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXC8P31273 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC8P31273 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
HOXC8P31273 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
HOXC8P31273 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
HOXC8P31273 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
HOXC8P31273 AC092692.1-201ENST00000623625 2595 ntBASIC6.71□□□□□ -1.33
HOXC8P31273 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
HOXC8P31273 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC8P31273 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC8P31273 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC8P31273 FAM32BP-201ENST00000344033 333 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HOXC8P31273 RNA5SP242-201ENST00000364171 118 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXC8P31273 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC8P31273 RN7SKP293-201ENST00000411389 296 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 Z68694.1-201ENST00000413929 841 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXC8P31273 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.71□□□□□ -1.34
HOXC8P31273 SUMO2P3-201ENST00000438311 288 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXC8P31273 BMS1P10-201ENST00000443754 1120 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HOXC8P31273 RN7SL717P-201ENST00000478343 297 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 AC114728.1-201ENST00000488289 483 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 TMEM97P2-201ENST00000517841 403 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 AC110056.1-201ENST00000525759 911 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXC8P31273 AC090022.1-201ENST00000546569 311 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXC8P31273 RNU4ATAC-201ENST00000580972 127 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 AC007448.1-201ENST00000582714 234 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC8P31273 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXC8P31273 AP001542.1-201ENST00000591314 200 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXC8P31273 AC116667.2-201ENST00000641075 823 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC8P31273 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC8P31273 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXC8P31273 AP001541.1-201ENST00000623322 1904 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXC8P31273 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC8P31273 AL157831.2-201ENST00000564681 3095 ntBASIC6.71□□□□□ -1.34
HOXC8P31273 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXC8P31273 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC8P31273 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HOXC8P31273 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC8P31273 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC8P31273 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC8P31273 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC8P31273 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC8P31273 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC8P31273 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HOXC8P31273 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
HOXC8P31273 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HOXC8P31273 AC245060.4-201ENST00000413293 1121 ntBASIC6.7□□□□□ -1.34
HOXC8P31273 RANP7-201ENST00000418085 644 ntBASIC6.7□□□□□ -1.34
HOXC8P31273 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC8P31273 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC8P31273 AC064862.4-201ENST00000442180 334 ntBASIC6.7□□□□□ -1.34
HOXC8P31273 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.7□□□□□ -1.34
HOXC8P31273 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC8P31273 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.7□□□□□ -1.34
HOXC8P31273 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC8P31273 WBP1LP3-201ENST00000523033 208 ntBASIC6.7□□□□□ -1.34
HOXC8P31273 IGHV1-14-201ENST00000523391 241 ntBASIC6.7□□□□□ -1.34
HOXC8P31273 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.7□□□□□ -1.34
HOXC8P31273 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.7□□□□□ -1.34
HOXC8P31273 PCNAP4-201ENST00000532690 730 ntBASIC6.7□□□□□ -1.34
HOXC8P31273 MIR3176-201ENST00000582210 90 ntBASIC6.7□□□□□ -1.34
HOXC8P31273 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 AL352984.2-201ENST00000611153 546 ntBASIC6.7□□□□□ -1.34
HOXC8P31273 AL512624.1-201ENST00000613638 469 ntBASIC6.7□□□□□ -1.34
HOXC8P31273 Z93929.1-201ENST00000418200 1475 ntBASIC6.7□□□□□ -1.34
HOXC8P31273 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.7□□□□□ -1.34
HOXC8P31273 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
HOXC8P31273 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.7□□□□□ -1.34
HOXC8P31273 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC8P31273 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
HOXC8P31273 AL359091.1-201ENST00000449048 1734 ntBASIC6.7□□□□□ -1.34
HOXC8P31273 AL022323.4-201ENST00000623980 13120 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms