Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.63□□□□□ -1.51
SHC1P29353 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.63□□□□□ -1.51
SHC1P29353 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.63□□□□□ -1.51
SHC1P29353 RANP2-201ENST00000456833 229 ntBASIC5.63□□□□□ -1.51
SHC1P29353 RN7SL362P-201ENST00000494228 267 ntBASIC5.63□□□□□ -1.51
SHC1P29353 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.63□□□□□ -1.51
SHC1P29353 AC018797.1-201ENST00000510791 255 ntBASIC5.63□□□□□ -1.51
SHC1P29353 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.63□□□□□ -1.51
SHC1P29353 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.63□□□□□ -1.51
SHC1P29353 Y_RNA.710-201ENST00000516975 110 ntBASIC5.63□□□□□ -1.51
SHC1P29353 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.63□□□□□ -1.51
SHC1P29353 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.63□□□□□ -1.51
SHC1P29353 AC092865.1-201ENST00000544395 1023 ntBASIC5.63□□□□□ -1.51
SHC1P29353 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.63□□□□□ -1.51
SHC1P29353 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.63□□□□□ -1.51
SHC1P29353 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.63□□□□□ -1.51
SHC1P29353 AC090651.1-201ENST00000567865 634 ntBASIC5.63□□□□□ -1.51
SHC1P29353 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.63□□□□□ -1.51
SHC1P29353 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.63□□□□□ -1.51
SHC1P29353 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.63□□□□□ -1.51
SHC1P29353 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHC1P29353 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.63□□□□□ -1.51
SHC1P29353 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
SHC1P29353 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.63□□□□□ -1.51
SHC1P29353 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.63□□□□□ -1.51
SHC1P29353 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.63□□□□□ -1.51
SHC1P29353 AL359091.2-201ENST00000609303 556 ntBASIC5.63□□□□□ -1.51
SHC1P29353 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.63□□□□□ -1.51
SHC1P29353 AL596275.2-207ENST00000641188 675 ntBASIC5.63□□□□□ -1.51
SHC1P29353 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
SHC1P29353 AP001541.1-201ENST00000623322 1904 ntBASIC5.63□□□□□ -1.51
SHC1P29353 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.63□□□□□ -1.51
SHC1P29353 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.63□□□□□ -1.51
SHC1P29353 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.63□□□□□ -1.51
SHC1P29353 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.63□□□□□ -1.51
SHC1P29353 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SHC1P29353 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SHC1P29353 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHC1P29353 AC015799.1-201ENST00000622996 3122 ntBASIC5.63□□□□□ -1.51
SHC1P29353 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.63□□□□□ -1.51
SHC1P29353 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHC1P29353 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHC1P29353 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHC1P29353 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHC1P29353 RNU1-49P-201ENST00000363468 159 ntBASIC5.62□□□□□ -1.51
SHC1P29353 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHC1P29353 MIR433-201ENST00000384837 93 ntBASIC5.62□□□□□ -1.51
SHC1P29353 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHC1P29353 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 AC092865.3-201ENST00000425390 1026 ntBASIC5.62□□□□□ -1.51
SHC1P29353 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.62□□□□□ -1.51
SHC1P29353 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 AL590004.3-202ENST00000445883 451 ntBASIC5.62□□□□□ -1.51
SHC1P29353 TIMM8BP2-201ENST00000445940 251 ntBASIC5.62□□□□□ -1.51
SHC1P29353 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 MORF4-201ENST00000447135 971 ntBASIC5.62□□□□□ -1.51
SHC1P29353 HIGD1AP16-201ENST00000450986 258 ntBASIC5.62□□□□□ -1.51
SHC1P29353 RPS27AP3-201ENST00000453803 454 ntBASIC5.62□□□□□ -1.51
SHC1P29353 AL445687.2-201ENST00000458156 728 ntBASIC5.62□□□□□ -1.51
SHC1P29353 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 RPL34P33-201ENST00000486062 334 ntBASIC5.62□□□□□ -1.51
SHC1P29353 RPL12P30-201ENST00000488389 499 ntBASIC5.62□□□□□ -1.51
SHC1P29353 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHC1P29353 AC095052.1-201ENST00000509955 863 ntBASIC5.62□□□□□ -1.51
SHC1P29353 AC010343.2-201ENST00000510162 224 ntBASIC5.62□□□□□ -1.51
SHC1P29353 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 KHDC1P1-201ENST00000511053 508 ntBASIC5.62□□□□□ -1.51
SHC1P29353 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHC1P29353 Vault.2-201ENST00000516519 98 ntBASIC5.62□□□□□ -1.51
SHC1P29353 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.62□□□□□ -1.51
SHC1P29353 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 NPIPB14P-203ENST00000532298 987 ntBASIC5.62□□□□□ -1.51
SHC1P29353 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHC1P29353 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHC1P29353 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHC1P29353 RN7SL230P-201ENST00000580835 303 ntBASIC5.62□□□□□ -1.51
SHC1P29353 AP005136.2-201ENST00000583253 1049 ntBASIC5.62□□□□□ -1.51
SHC1P29353 MIR4420-201ENST00000583944 77 ntBASIC5.62□□□□□ -1.51
SHC1P29353 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 AL021368.3-201ENST00000607119 578 ntBASIC5.62□□□□□ -1.51
SHC1P29353 AL080312.2-201ENST00000613001 630 ntBASIC5.62□□□□□ -1.51
SHC1P29353 AL683826.1-201ENST00000624104 627 ntBASIC5.62□□□□□ -1.51
SHC1P29353 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 AC073488.6-201ENST00000632293 754 ntBASIC5.62□□□□□ -1.51
SHC1P29353 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 OR7A1P-202ENST00000641542 1158 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms