Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC7.08□□□□□ -1.28
COL8A1P27658 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.08□□□□□ -1.28
COL8A1P27658 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC7.08□□□□□ -1.28
COL8A1P27658 AC008895.1-201ENST00000624074 2622 ntBASIC7.08□□□□□ -1.28
COL8A1P27658 COG2-201ENST00000366668 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL8A1P27658 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC7.08□□□□□ -1.28
COL8A1P27658 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL8A1P27658 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL8A1P27658 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC7.08□□□□□ -1.28
COL8A1P27658 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL8A1P27658 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL8A1P27658 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
COL8A1P27658 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 HSPD1P5-201ENST00000511127 1720 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 HERC2P5-201ENST00000562687 3825 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
COL8A1P27658 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 DCAF13P1-201ENST00000495256 1330 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7.07□□□□□ -1.28
COL8A1P27658 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL8A1P27658 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC7.07□□□□□ -1.28
COL8A1P27658 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC7.07□□□□□ -1.28
COL8A1P27658 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.07□□□□□ -1.28
COL8A1P27658 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 AL513318.2-201ENST00000602579 2012 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 ZNF300P1-201ENST00000356555 1822 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL8A1P27658 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL8A1P27658 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 OR10D1P-201ENST00000355343 936 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 RNU6-877P-201ENST00000383868 107 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 TRBV10-1-201ENST00000390364 412 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL8A1P27658 AL391422.1-201ENST00000402155 436 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC7.07□□□□□ -1.28
COL8A1P27658 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.07□□□□□ -1.28
COL8A1P27658 AC018644.1-201ENST00000429934 551 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC7.07□□□□□ -1.28
COL8A1P27658 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.07□□□□□ -1.28
COL8A1P27658 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC7.07□□□□□ -1.28
COL8A1P27658 SUMO1P3-201ENST00000439961 304 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 RPS10P14-201ENST00000440748 502 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.07□□□□□ -1.28
COL8A1P27658 RPL31P15-201ENST00000449770 338 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 VDAC2P4-201ENST00000452925 711 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 AC004890.1-201ENST00000461005 181 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 AC004801.2-201ENST00000468202 779 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 AC126615.1-201ENST00000470084 630 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.07□□□□□ -1.28
COL8A1P27658 RN7SL464P-201ENST00000492743 297 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.07□□□□□ -1.28
COL8A1P27658 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC7.07□□□□□ -1.28
COL8A1P27658 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.07□□□□□ -1.28
COL8A1P27658 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.07□□□□□ -1.28
COL8A1P27658 BTF3P13-201ENST00000513224 490 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.07□□□□□ -1.28
COL8A1P27658 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.07□□□□□ -1.28
COL8A1P27658 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC7.07□□□□□ -1.28
COL8A1P27658 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
COL8A1P27658 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.07□□□□□ -1.28
COL8A1P27658 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC7.07□□□□□ -1.28
COL8A1P27658 NPIPB14P-203ENST00000532298 987 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 AK6P1-201ENST00000540219 478 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.07□□□□□ -1.28
COL8A1P27658 NACA-211ENST00000548563 827 ntTSL 5 BASIC7.07□□□□□ -1.28
COL8A1P27658 AC079363.1-201ENST00000551366 1125 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 AC110588.1-201ENST00000559699 137 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC7.07□□□□□ -1.28
COL8A1P27658 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.07□□□□□ -1.28
COL8A1P27658 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC7.07□□□□□ -1.28
COL8A1P27658 HMGB1P33-201ENST00000563485 527 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 AC024614.1-201ENST00000577546 307 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.07□□□□□ -1.28
COL8A1P27658 AC139085.1-201ENST00000582716 182 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 AL109936.2-201ENST00000605350 650 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 AC022743.1-201ENST00000624990 664 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 FAM111A-202ENST00000420244 3780 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
COL8A1P27658 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 EML5-201ENST00000380664 5910 ntTSL 5 BASIC7.07□□□□□ -1.28
COL8A1P27658 AC079777.1-201ENST00000623836 1953 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
COL8A1P27658 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 OR4G11P-202ENST00000642116 1414 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 GFM2-207ENST00000509430 3047 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
COL8A1P27658 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
COL8A1P27658 ZNF702P-201ENST00000270443 2990 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 AC117529.2-201ENST00000512159 2068 ntBASIC7.07□□□□□ -1.28
COL8A1P27658 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC7.07□□□□□ -1.28
COL8A1P27658 NEPNP-201ENST00000404786 1371 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 299.6 ms