Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COL8A2P25067 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 AC006499.4-201ENST00000510947 694 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 OR5H7P-201ENST00000514084 930 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.18□□□□□ -1.58
COL8A2P25067 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.18□□□□□ -1.58
COL8A2P25067 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.18□□□□□ -1.58
COL8A2P25067 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.18□□□□□ -1.58
COL8A2P25067 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.18□□□□□ -1.58
COL8A2P25067 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.18□□□□□ -1.58
COL8A2P25067 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.18□□□□□ -1.58
COL8A2P25067 LINC00556-201ENST00000569603 412 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.18□□□□□ -1.58
COL8A2P25067 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.18□□□□□ -1.58
COL8A2P25067 AC008555.7-201ENST00000605008 583 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 AC022726.2-201ENST00000634673 547 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.18□□□□□ -1.58
COL8A2P25067 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
COL8A2P25067 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
COL8A2P25067 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.18□□□□□ -1.58
COL8A2P25067 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 AP000547.3-204ENST00000588548 2523 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
COL8A2P25067 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 AC078880.4-201ENST00000617627 1749 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.17□□□□□ -1.58
COL8A2P25067 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.17□□□□□ -1.58
COL8A2P25067 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.17□□□□□ -1.58
COL8A2P25067 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 RNFT1P3-201ENST00000340898 1052 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 RNA5SP333-201ENST00000363466 118 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 RNA5SP334-201ENST00000364825 118 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.17□□□□□ -1.58
COL8A2P25067 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 AC245096.1-201ENST00000413104 546 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.17□□□□□ -1.58
COL8A2P25067 AL096829.1-201ENST00000413677 457 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.17□□□□□ -1.58
COL8A2P25067 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.17□□□□□ -1.58
COL8A2P25067 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.17□□□□□ -1.58
COL8A2P25067 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.17□□□□□ -1.58
COL8A2P25067 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.17□□□□□ -1.58
COL8A2P25067 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 FTLP8-201ENST00000446770 267 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 SUMO2P10-201ENST00000452006 288 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 PRMT5P1-201ENST00000514351 598 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.17□□□□□ -1.58
COL8A2P25067 RNA5SP400-201ENST00000517155 111 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.17□□□□□ -1.58
COL8A2P25067 KCTD9P4-201ENST00000526766 1166 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.17□□□□□ -1.58
COL8A2P25067 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.17□□□□□ -1.58
COL8A2P25067 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.17□□□□□ -1.58
COL8A2P25067 AC007956.1-201ENST00000555623 542 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.17□□□□□ -1.58
COL8A2P25067 AP005119.1-201ENST00000580956 292 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 AL096712.1-201ENST00000614561 159 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 AC245014.3-201ENST00000618589 347 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 AC096708.4-201ENST00000620563 552 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.17□□□□□ -1.58
COL8A2P25067 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
COL8A2P25067 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
COL8A2P25067 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
COL8A2P25067 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.17□□□□□ -1.58
COL8A2P25067 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.17□□□□□ -1.58
COL8A2P25067 AC005725.1-201ENST00000577346 2607 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 AC119674.1-202ENST00000641333 1860 ntBASIC5.17□□□□□ -1.58
COL8A2P25067 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.17□□□□□ -1.58
COL8A2P25067 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
COL8A2P25067 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.17□□□□□ -1.58
COL8A2P25067 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms