Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
TPM1P09493 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.7□□□□□ -1.34
TPM1P09493 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM1P09493 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM1P09493 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.69□□□□□ -1.34
TPM1P09493 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
TPM1P09493 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TPM1P09493 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.69□□□□□ -1.34
TPM1P09493 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TPM1P09493 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TPM1P09493 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.69□□□□□ -1.34
TPM1P09493 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.69□□□□□ -1.34
TPM1P09493 RNU1-5P-201ENST00000362684 144 ntBASIC6.69□□□□□ -1.34
TPM1P09493 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.69□□□□□ -1.34
TPM1P09493 NPM1P38-201ENST00000403835 865 ntBASIC6.69□□□□□ -1.34
TPM1P09493 AL158827.1-201ENST00000416300 391 ntBASIC6.69□□□□□ -1.34
TPM1P09493 SETP9-201ENST00000423837 832 ntBASIC6.69□□□□□ -1.34
TPM1P09493 PPIAP10-201ENST00000438675 458 ntBASIC6.69□□□□□ -1.34
TPM1P09493 RPS10P14-201ENST00000440748 502 ntBASIC6.69□□□□□ -1.34
TPM1P09493 RN7SL413P-201ENST00000482700 297 ntBASIC6.69□□□□□ -1.34
TPM1P09493 RPL23AP40-201ENST00000487630 390 ntBASIC6.69□□□□□ -1.34
TPM1P09493 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
TPM1P09493 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TPM1P09493 AC105391.1-201ENST00000503155 1045 ntBASIC6.69□□□□□ -1.34
TPM1P09493 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.69□□□□□ -1.34
TPM1P09493 RNA5SP418-201ENST00000515951 117 ntBASIC6.69□□□□□ -1.34
TPM1P09493 snoU109.5-201ENST00000516231 132 ntBASIC6.69□□□□□ -1.34
TPM1P09493 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.69□□□□□ -1.34
TPM1P09493 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TPM1P09493 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.69□□□□□ -1.34
TPM1P09493 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.69□□□□□ -1.34
TPM1P09493 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.69□□□□□ -1.34
TPM1P09493 FXYD6P1-201ENST00000604857 285 ntBASIC6.69□□□□□ -1.34
TPM1P09493 AL022394.1-201ENST00000606979 292 ntBASIC6.69□□□□□ -1.34
TPM1P09493 AC010998.3-201ENST00000613871 631 ntBASIC6.69□□□□□ -1.34
TPM1P09493 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TPM1P09493 AP003108.4-201ENST00000623917 878 ntBASIC6.69□□□□□ -1.34
TPM1P09493 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
TPM1P09493 AC004023.1-201ENST00000561473 1744 ntBASIC6.69□□□□□ -1.34
TPM1P09493 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TPM1P09493 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
TPM1P09493 GVINP1-202ENST00000531871 7271 ntBASIC6.68□□□□□ -1.34
TPM1P09493 AC016583.1-201ENST00000624221 2431 ntBASIC6.68□□□□□ -1.34
TPM1P09493 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
TPM1P09493 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TPM1P09493 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TPM1P09493 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.68□□□□□ -1.34
TPM1P09493 AC138907.8-201ENST00000623981 2256 ntBASIC6.68□□□□□ -1.34
TPM1P09493 AC010894.1-201ENST00000313760 361 ntBASIC6.68□□□□□ -1.34
TPM1P09493 RNA5SP308-201ENST00000362532 115 ntBASIC6.68□□□□□ -1.34
TPM1P09493 RNA5SP302-201ENST00000364896 100 ntBASIC6.68□□□□□ -1.34
TPM1P09493 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
TPM1P09493 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.68□□□□□ -1.34
TPM1P09493 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.68□□□□□ -1.34
TPM1P09493 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.68□□□□□ -1.34
TPM1P09493 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.68□□□□□ -1.34
TPM1P09493 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.68□□□□□ -1.34
TPM1P09493 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.68□□□□□ -1.34
TPM1P09493 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.68□□□□□ -1.34
TPM1P09493 RN7SL372P-201ENST00000461982 298 ntBASIC6.68□□□□□ -1.34
TPM1P09493 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.68□□□□□ -1.34
TPM1P09493 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.68□□□□□ -1.34
TPM1P09493 AC008868.1-201ENST00000509786 737 ntBASIC6.68□□□□□ -1.34
TPM1P09493 MINOS1P4-201ENST00000515470 318 ntBASIC6.68□□□□□ -1.34
TPM1P09493 SNORA70.11-201ENST00000515987 138 ntBASIC6.68□□□□□ -1.34
TPM1P09493 SNORA70.13-201ENST00000516116 138 ntBASIC6.68□□□□□ -1.34
TPM1P09493 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
TPM1P09493 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
TPM1P09493 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.68□□□□□ -1.34
TPM1P09493 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.68□□□□□ -1.34
TPM1P09493 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.68□□□□□ -1.34
TPM1P09493 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.68□□□□□ -1.34
TPM1P09493 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC6.68□□□□□ -1.34
TPM1P09493 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TPM1P09493 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
TPM1P09493 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.68□□□□□ -1.34
TPM1P09493 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TPM1P09493 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TPM1P09493 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TPM1P09493 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TPM1P09493 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
TPM1P09493 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.67□□□□□ -1.34
TPM1P09493 MTND5P12-201ENST00000502851 1449 ntBASIC6.67□□□□□ -1.34
TPM1P09493 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TPM1P09493 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TPM1P09493 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TPM1P09493 RN7SKP128-201ENST00000364270 303 ntBASIC6.67□□□□□ -1.34
TPM1P09493 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
TPM1P09493 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.67□□□□□ -1.34
TPM1P09493 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.67□□□□□ -1.34
TPM1P09493 BMS1P11-201ENST00000442351 885 ntBASIC6.67□□□□□ -1.34
TPM1P09493 CUBNP2-201ENST00000443534 1139 ntBASIC6.67□□□□□ -1.34
TPM1P09493 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.67□□□□□ -1.34
TPM1P09493 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.67□□□□□ -1.34
TPM1P09493 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.67□□□□□ -1.34
TPM1P09493 BMS1P9-201ENST00000457640 885 ntBASIC6.67□□□□□ -1.34
TPM1P09493 RN7SL552P-201ENST00000462094 276 ntBASIC6.67□□□□□ -1.34
TPM1P09493 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.67□□□□□ -1.34
TPM1P09493 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.67□□□□□ -1.34
TPM1P09493 SNX18P24-201ENST00000505249 671 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms