Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.41□□□□□ -1.22
THBS1P07996 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC7.41□□□□□ -1.22
THBS1P07996 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC7.41□□□□□ -1.22
THBS1P07996 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
THBS1P07996 Y_RNA.89-201ENST00000363031 102 ntBASIC7.41□□□□□ -1.22
THBS1P07996 RNU6-707P-201ENST00000364647 95 ntBASIC7.41□□□□□ -1.22
THBS1P07996 RNU6-621P-201ENST00000364752 109 ntBASIC7.41□□□□□ -1.22
THBS1P07996 Y_RNA.302-201ENST00000364997 102 ntBASIC7.41□□□□□ -1.22
THBS1P07996 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
THBS1P07996 FANK1-201ENST00000368689 522 ntTSL 3 BASIC7.41□□□□□ -1.22
THBS1P07996 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
THBS1P07996 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 RACK1-201ENST00000376817 965 ntTSL 5 BASIC7.41□□□□□ -1.22
THBS1P07996 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 RNA5SP256-201ENST00000390978 113 ntBASIC7.41□□□□□ -1.22
THBS1P07996 MTCO3P40-201ENST00000392516 676 ntBASIC7.41□□□□□ -1.22
THBS1P07996 MORN2-202ENST00000409077 465 ntTSL 5 BASIC7.41□□□□□ -1.22
THBS1P07996 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC7.41□□□□□ -1.22
THBS1P07996 HMGB3P31-201ENST00000413333 595 ntBASIC7.41□□□□□ -1.22
THBS1P07996 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC7.41□□□□□ -1.22
THBS1P07996 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC7.41□□□□□ -1.22
THBS1P07996 AC098828.1-201ENST00000436164 440 ntBASIC7.41□□□□□ -1.22
THBS1P07996 AL359711.1-201ENST00000441999 123 ntBASIC7.41□□□□□ -1.22
THBS1P07996 USP9YP15-201ENST00000442391 422 ntBASIC7.41□□□□□ -1.22
THBS1P07996 AL445686.1-201ENST00000443086 348 ntBASIC7.41□□□□□ -1.22
THBS1P07996 AC244505.5-201ENST00000443639 207 ntBASIC7.41□□□□□ -1.22
THBS1P07996 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC7.41□□□□□ -1.22
THBS1P07996 ARL2BPP7-201ENST00000446421 490 ntBASIC7.41□□□□□ -1.22
THBS1P07996 AC239367.2-201ENST00000447309 705 ntBASIC7.41□□□□□ -1.22
THBS1P07996 AL451081.2-201ENST00000448115 933 ntBASIC7.41□□□□□ -1.22
THBS1P07996 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.41□□□□□ -1.22
THBS1P07996 OR52A4P-201ENST00000472867 958 ntBASIC7.41□□□□□ -1.22
THBS1P07996 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.41□□□□□ -1.22
THBS1P07996 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.41□□□□□ -1.22
THBS1P07996 DUTP7-201ENST00000507982 486 ntBASIC7.41□□□□□ -1.22
THBS1P07996 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.41□□□□□ -1.22
THBS1P07996 RNA5SP287-201ENST00000516358 103 ntBASIC7.41□□□□□ -1.22
THBS1P07996 RNA5SP460-201ENST00000516789 100 ntBASIC7.41□□□□□ -1.22
THBS1P07996 IGKV3D-31-201ENST00000519131 281 ntBASIC7.41□□□□□ -1.22
THBS1P07996 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.41□□□□□ -1.22
THBS1P07996 AF235103.2-201ENST00000525753 346 ntBASIC7.41□□□□□ -1.22
THBS1P07996 AP000435.1-201ENST00000528539 496 ntBASIC7.41□□□□□ -1.22
THBS1P07996 OR4A11P-201ENST00000529557 906 ntBASIC7.41□□□□□ -1.22
THBS1P07996 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.41□□□□□ -1.22
THBS1P07996 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 ARL2BPP2-201ENST00000550907 489 ntBASIC7.41□□□□□ -1.22
THBS1P07996 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.41□□□□□ -1.22
THBS1P07996 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC7.41□□□□□ -1.22
THBS1P07996 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
THBS1P07996 RPS3AP23-202ENST00000574601 686 ntBASIC7.41□□□□□ -1.22
THBS1P07996 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC7.41□□□□□ -1.22
THBS1P07996 BNIP3P22-201ENST00000593399 556 ntBASIC7.41□□□□□ -1.22
THBS1P07996 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC7.41□□□□□ -1.22
THBS1P07996 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.41□□□□□ -1.22
THBS1P07996 AC019193.2-201ENST00000610012 634 ntBASIC7.41□□□□□ -1.22
THBS1P07996 RBM22P6-201ENST00000611682 867 ntBASIC7.41□□□□□ -1.22
THBS1P07996 MESTIT1_2.1-201ENST00000616328 235 ntBASIC7.41□□□□□ -1.22
THBS1P07996 AC069209.1-201ENST00000619282 651 ntBASIC7.41□□□□□ -1.22
THBS1P07996 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.41□□□□□ -1.22
THBS1P07996 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
THBS1P07996 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC7.41□□□□□ -1.22
THBS1P07996 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.41□□□□□ -1.22
THBS1P07996 MIR6863-201ENST00000636112 90 ntBASIC7.41□□□□□ -1.22
THBS1P07996 AF001550.2-201ENST00000636643 217 ntBASIC7.41□□□□□ -1.22
THBS1P07996 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.41□□□□□ -1.22
THBS1P07996 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.41□□□□□ -1.22
THBS1P07996 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 AC087203.2-201ENST00000526502 1587 ntBASIC7.41□□□□□ -1.22
THBS1P07996 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
THBS1P07996 AC117382.2-201ENST00000564748 3151 ntBASIC7.41□□□□□ -1.22
THBS1P07996 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
THBS1P07996 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.4□□□□□ -1.22
THBS1P07996 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
THBS1P07996 AC117529.2-201ENST00000512159 2068 ntBASIC7.4□□□□□ -1.22
THBS1P07996 OR6M2P-202ENST00000641780 2063 ntBASIC7.4□□□□□ -1.22
THBS1P07996 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC7.4□□□□□ -1.22
THBS1P07996 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
THBS1P07996 AC026464.2-201ENST00000567834 2421 ntBASIC7.4□□□□□ -1.22
THBS1P07996 SMG1P1-202ENST00000309865 4223 ntBASIC7.4□□□□□ -1.22
THBS1P07996 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms