Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RN7SL83P-201ENST00000468131 297 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.73□□□□□ -1.49
MT-ND1P03886 RN7SL413P-201ENST00000482700 297 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 AC124945.1-201ENST00000485133 188 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 TRBV5-2-201ENST00000489095 273 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 GOLGA5P1-201ENST00000507317 980 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.73□□□□□ -1.49
MT-ND1P03886 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.73□□□□□ -1.49
MT-ND1P03886 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.73□□□□□ -1.49
MT-ND1P03886 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 AC084851.2-201ENST00000530377 364 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.73□□□□□ -1.49
MT-ND1P03886 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
MT-ND1P03886 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.73□□□□□ -1.49
MT-ND1P03886 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.73□□□□□ -1.49
MT-ND1P03886 AC090774.2-201ENST00000584708 322 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.73□□□□□ -1.49
MT-ND1P03886 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.73□□□□□ -1.49
MT-ND1P03886 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.73□□□□□ -1.49
MT-ND1P03886 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.73□□□□□ -1.49
MT-ND1P03886 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
MT-ND1P03886 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
MT-ND1P03886 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.73□□□□□ -1.49
MT-ND1P03886 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MT-ND1P03886 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.72□□□□□ -1.49
MT-ND1P03886 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MT-ND1P03886 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
MT-ND1P03886 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
MT-ND1P03886 AP000432.2-201ENST00000624164 2048 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 CASC19-260ENST00000641828 2001 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
MT-ND1P03886 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MT-ND1P03886 AL592429.1-201ENST00000403909 1473 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
MT-ND1P03886 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
MT-ND1P03886 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.72□□□□□ -1.49
MT-ND1P03886 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MT-ND1P03886 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MT-ND1P03886 SNORA77.2-201ENST00000408571 112 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.72□□□□□ -1.49
MT-ND1P03886 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.72□□□□□ -1.49
MT-ND1P03886 RPS7P14-201ENST00000426405 583 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.72□□□□□ -1.49
MT-ND1P03886 AL645939.3-201ENST00000435408 225 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.72□□□□□ -1.49
MT-ND1P03886 GAPDHP37-201ENST00000442317 968 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.72□□□□□ -1.49
MT-ND1P03886 AL162739.1-201ENST00000450606 307 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 RAB28P2-201ENST00000454299 641 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.72□□□□□ -1.49
MT-ND1P03886 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.72□□□□□ -1.49
MT-ND1P03886 RN7SL284P-201ENST00000498823 275 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 SETP21-201ENST00000514799 892 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 IGHV4-55-201ENST00000520889 368 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 OR6M2P-201ENST00000529831 871 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.72□□□□□ -1.49
MT-ND1P03886 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
MT-ND1P03886 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.72□□□□□ -1.49
MT-ND1P03886 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.72□□□□□ -1.49
MT-ND1P03886 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.72□□□□□ -1.49
MT-ND1P03886 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.72□□□□□ -1.49
MT-ND1P03886 AL589743.6-201ENST00000611025 117 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 AL136097.3-201ENST00000611097 505 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 AC022106.1-201ENST00000612834 766 ntBASIC5.72□□□□□ -1.49
MT-ND1P03886 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
MT-ND1P03886 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.72□□□□□ -1.49
MT-ND1P03886 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MT-ND1P03886 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MT-ND1P03886 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.72□□□□□ -1.49
MT-ND1P03886 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MT-ND1P03886 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MT-ND1P03886 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.72□□□□□ -1.49
MT-ND1P03886 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.72□□□□□ -1.49
MT-ND1P03886 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MT-ND1P03886 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.72□□□□□ -1.49
MT-ND1P03886 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
MT-ND1P03886 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
MT-ND1P03886 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
MT-ND1P03886 AC027279.4-201ENST00000624371 2072 ntBASIC5.71□□□□□ -1.49
MT-ND1P03886 AL359091.1-201ENST00000449048 1734 ntBASIC5.71□□□□□ -1.49
MT-ND1P03886 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
MT-ND1P03886 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
MT-ND1P03886 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
MT-ND1P03886 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.71□□□□□ -1.5
MT-ND1P03886 AL133243.2-201ENST00000610331 1621 ntBASIC5.71□□□□□ -1.5
MT-ND1P03886 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
MT-ND1P03886 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms