Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MED28P7-201ENST00000456611 530 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 RPS16P9-201ENST00000477220 427 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 OR9A1P-202ENST00000484361 945 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AC124945.1-201ENST00000485133 188 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 RN7SL868P-201ENST00000485915 303 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AC105391.1-201ENST00000503155 1045 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AC008868.1-201ENST00000509786 737 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 SCARNA5-201ENST00000516201 276 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AC103855.4-201ENST00000533158 265 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AL359219.2-201ENST00000555184 348 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 MIR378C-201ENST00000578683 81 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 RN7SL131P-201ENST00000579043 256 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 MIR4660-201ENST00000583549 74 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 MIR4428-201ENST00000584884 73 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 RPL12P48-201ENST00000605620 304 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 MIR8082-201ENST00000612488 81 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 MRPL57P3-201ENST00000619218 176 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AC007204.1-201ENST00000621794 555 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AC073857.1-201ENST00000625082 1054 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 TEX41-255ENST00000626404 610 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 MAPK10-328ENST00000641553 4009 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 RN7SKP145-201ENST00000363291 303 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 RNA5SP382-201ENST00000363355 112 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 RNA5SP176-201ENST00000390956 110 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 RNU1-56P-201ENST00000391303 164 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC087752.1-201ENST00000391360 558 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC245036.1-201ENST00000391727 309 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 MICG-208ENST00000416822 132 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AL161742.1-201ENST00000418154 584 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC016908.1-201ENST00000442571 1219 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 CUBNP2-201ENST00000443534 1139 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC126615.1-201ENST00000470084 630 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC099340.1-201ENST00000475247 599 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 RPL5P14-201ENST00000494197 878 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 RPL10P7-201ENST00000495649 625 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC134698.1-201ENST00000511619 643 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 RNA5SP230-201ENST00000517039 122 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 TPM3P3-201ENST00000521343 354 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 OR7E158P-201ENST00000524483 910 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC007066.2-202ENST00000566531 914 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 MIR5682-201ENST00000584864 76 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 MIR7159-201ENST00000620587 66 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AC005858.3-201ENST00000624756 589 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AP000550.3-201ENST00000637734 379 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 OR7A1P-202ENST00000641542 1158 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 AL442128.2-201ENST00000620246 1824 ntBASIC4.57□□□□□ -1.68
HLA-DQA1P01909 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms