Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
RNF40O75150 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
RNF40O75150 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC8.8□□□□□ -1
RNF40O75150 ATP5A1P1-201ENST00000454088 1321 ntBASIC8.8□□□□□ -1
RNF40O75150 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
RNF40O75150 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
RNF40O75150 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC8.79□□□□□ -1
RNF40O75150 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
RNF40O75150 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
RNF40O75150 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.79□□□□□ -1
RNF40O75150 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RNF40O75150 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8.79□□□□□ -1
RNF40O75150 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RNF40O75150 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RNF40O75150 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.79□□□□□ -1
RNF40O75150 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.79□□□□□ -1
RNF40O75150 RNU6-374P-201ENST00000364146 108 ntBASIC8.79□□□□□ -1
RNF40O75150 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
RNF40O75150 RNU6-1122P-201ENST00000384449 107 ntBASIC8.79□□□□□ -1
RNF40O75150 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC8.79□□□□□ -1
RNF40O75150 RPL26P29-201ENST00000415623 438 ntBASIC8.79□□□□□ -1
RNF40O75150 MTND3P17-201ENST00000416968 344 ntBASIC8.79□□□□□ -1
RNF40O75150 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC8.79□□□□□ -1
RNF40O75150 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC8.79□□□□□ -1
RNF40O75150 NUP35P1-201ENST00000422734 947 ntBASIC8.79□□□□□ -1
RNF40O75150 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC8.79□□□□□ -1
RNF40O75150 IGLV3-4-201ENST00000432300 244 ntBASIC8.79□□□□□ -1
RNF40O75150 TAAR7P-201ENST00000436141 242 ntBASIC8.79□□□□□ -1
RNF40O75150 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC8.79□□□□□ -1
RNF40O75150 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC8.79□□□□□ -1
RNF40O75150 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC8.79□□□□□ -1
RNF40O75150 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC8.79□□□□□ -1
RNF40O75150 RPSAP54-201ENST00000454001 886 ntBASIC8.79□□□□□ -1
RNF40O75150 MTCO3P11-201ENST00000455103 774 ntBASIC8.79□□□□□ -1
RNF40O75150 AL590639.1-201ENST00000456484 337 ntBASIC8.79□□□□□ -1
RNF40O75150 AC010878.1-201ENST00000456500 1047 ntBASIC8.79□□□□□ -1
RNF40O75150 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC8.79□□□□□ -1
RNF40O75150 SNX18P4-201ENST00000456554 838 ntBASIC8.79□□□□□ -1
RNF40O75150 RN7SL496P-201ENST00000470372 290 ntBASIC8.79□□□□□ -1
RNF40O75150 AC018695.1-201ENST00000484096 664 ntBASIC8.79□□□□□ -1
RNF40O75150 AC244505.1-201ENST00000502642 307 ntBASIC8.79□□□□□ -1
RNF40O75150 GUSBP3-201ENST00000509348 423 ntBASIC8.79□□□□□ -1
RNF40O75150 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC8.79□□□□□ -1
RNF40O75150 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC8.79□□□□□ -1
RNF40O75150 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC8.79□□□□□ -1
RNF40O75150 OR5AN2P-201ENST00000534535 896 ntBASIC8.79□□□□□ -1
RNF40O75150 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC8.79□□□□□ -1
RNF40O75150 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC8.79□□□□□ -1
RNF40O75150 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC8.79□□□□□ -1
RNF40O75150 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC8.79□□□□□ -1
RNF40O75150 AL163952.1-202ENST00000569625 600 ntBASIC8.79□□□□□ -1
RNF40O75150 GLUD1P2-201ENST00000583339 201 ntBASIC8.79□□□□□ -1
RNF40O75150 GLUD1P8-201ENST00000585063 203 ntBASIC8.79□□□□□ -1
RNF40O75150 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC8.79□□□□□ -1
RNF40O75150 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC8.79□□□□□ -1
RNF40O75150 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC8.79□□□□□ -1
RNF40O75150 FAM30B-201ENST00000611556 397 ntBASIC8.79□□□□□ -1
RNF40O75150 AC021106.3-201ENST00000623925 531 ntBASIC8.79□□□□□ -1
RNF40O75150 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC8.79□□□□□ -1
RNF40O75150 MIR3662-201ENST00000637030 95 ntBASIC8.79□□□□□ -1
RNF40O75150 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
RNF40O75150 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC8.79□□□□□ -1
RNF40O75150 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.79□□□□□ -1
RNF40O75150 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.79□□□□□ -1
RNF40O75150 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
RNF40O75150 AC135352.1-201ENST00000506173 1418 ntBASIC8.79□□□□□ -1
RNF40O75150 RARSP1-201ENST00000542842 1418 ntBASIC8.79□□□□□ -1
RNF40O75150 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RNF40O75150 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
RNF40O75150 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RNF40O75150 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
RNF40O75150 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
RNF40O75150 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RNF40O75150 AC019155.2-201ENST00000420224 1918 ntTSL 1 (best) BASIC8.78□□□□□ -1
RNF40O75150 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.78□□□□□ -1
RNF40O75150 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
RNF40O75150 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
RNF40O75150 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
RNF40O75150 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
RNF40O75150 AC055716.2-201ENST00000552545 2441 ntBASIC8.78□□□□□ -1
RNF40O75150 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RNF40O75150 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC8.78□□□□□ -1
RNF40O75150 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC8.78□□□□□ -1
RNF40O75150 RNU1-47P-201ENST00000362966 163 ntBASIC8.78□□□□□ -1
RNF40O75150 RNU6-1331P-201ENST00000363658 106 ntBASIC8.78□□□□□ -1
RNF40O75150 RNA5SP141-201ENST00000364543 120 ntBASIC8.78□□□□□ -1
RNF40O75150 SNORA51.2-201ENST00000364595 132 ntBASIC8.78□□□□□ -1
RNF40O75150 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC8.78□□□□□ -1
RNF40O75150 CLLU1OS-201ENST00000378487 686 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RNF40O75150 RNU6-463P-201ENST00000384340 107 ntBASIC8.78□□□□□ -1
RNF40O75150 SNORA75.4-201ENST00000391278 119 ntBASIC8.78□□□□□ -1
RNF40O75150 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.78□□□□□ -1
RNF40O75150 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
RNF40O75150 GSTA12P-201ENST00000402398 508 ntBASIC8.78□□□□□ -1
RNF40O75150 RN7SKP154-201ENST00000410136 290 ntBASIC8.78□□□□□ -1
RNF40O75150 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC8.78□□□□□ -1
RNF40O75150 RPL17P12-201ENST00000413391 526 ntBASIC8.78□□□□□ -1
RNF40O75150 TMSB10P1-201ENST00000415070 132 ntBASIC8.78□□□□□ -1
RNF40O75150 USP9YP36-201ENST00000424581 829 ntBASIC8.78□□□□□ -1
RNF40O75150 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms