Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RPL7L1P1-201ENST00000448259 785 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 OR52I1-201ENST00000450052 1050 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC005517.1-201ENST00000452091 489 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC018892.2-201ENST00000457656 693 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 ACA64.4-201ENST00000459070 127 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 RPL5P16-201ENST00000471467 790 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 TUBBP11-201ENST00000472255 252 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 RPL7AP2-201ENST00000496515 740 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AL135933.1-201ENST00000498657 802 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC133435.1-201ENST00000498753 576 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC008677.3-201ENST00000519146 666 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 DCN-207ENST00000546370 586 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 SMARCE1P3-201ENST00000553649 1231 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 ULK4P3-202ENST00000565158 593 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC138761.2-201ENST00000583878 343 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AL137072.1-201ENST00000603444 466 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AL390058.1-201ENST00000603834 629 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC008626.1-201ENST00000604384 255 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC096553.1-201ENST00000605169 829 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AL133406.3-201ENST00000606817 541 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 FRG1HP-203ENST00000615326 593 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 uc_338.31-201ENST00000615595 186 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 ARL17A-206ENST00000622488 524 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 RACK1-235ENST00000626067 564 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 PIGA-209ENST00000634582 965 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 MFSD8-234ENST00000641503 1082 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01963-201ENST00000562038 3148 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 MFSD8-219ENST00000641228 2559 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 SEPT10-205ENST00000415095 1605 ntTSL 5 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC063976.2-201ENST00000425667 3556 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.21□□□□□ -1.89
CHKB-CPT1BH3BT56 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CHKB-CPT1BH3BT56 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.21□□□□□ -1.89
CHKB-CPT1BH3BT56 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC3.21□□□□□ -1.89
CHKB-CPT1BH3BT56 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 OR10J6P-201ENST00000289731 930 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 OR52B1P-201ENST00000316506 909 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 VTRNA3-1P-201ENST00000362552 102 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 RNA5SP260-201ENST00000363849 111 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 RN7SKP55-201ENST00000364888 307 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 MIR137-201ENST00000385223 102 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 TRAV17-201ENST00000390445 484 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 DUTP8-201ENST00000418412 489 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC007365.2-201ENST00000428806 458 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 EIF3IP1-201ENST00000433048 967 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 RPL29P7-201ENST00000440227 457 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 HMGB3P9-201ENST00000441799 583 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms