Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AC079777.1-201ENST00000623836 1953 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 OR52B5P-204ENST00000641744 3467 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC016583.1-201ENST00000624221 2431 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 MIR191-201ENST00000384873 92 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 SNORA77.2-201ENST00000408571 112 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 SFR1P2-201ENST00000421841 730 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 CR848007.2-201ENST00000424918 787 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 RPSAP65-201ENST00000429660 595 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 BMP6P1-201ENST00000431230 679 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AL731534.1-201ENST00000434711 269 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC098818.1-201ENST00000478593 252 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 RN7SKP248-201ENST00000516278 305 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 BTG1P1-201ENST00000540396 508 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC009268.1-201ENST00000561352 1203 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC018558.5-201ENST00000565840 952 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC004232.2-201ENST00000574245 821 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC119403.2-201ENST00000590960 598 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 DNAJC19P3-201ENST00000594491 331 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AL135999.3-201ENST00000610501 812 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 uc_338.29-201ENST00000615099 168 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 MIR6813-201ENST00000621638 56 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 CCDC162P-202ENST00000368966 6751 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 AC119674.1-202ENST00000641333 1860 ntBASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV5S1A1TA0A578 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 RNU6-819P-201ENST00000364116 107 ntBASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 RPS26P38-201ENST00000414476 348 ntBASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 THEM7P-201ENST00000419556 672 ntBASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 RPS15AP30-201ENST00000420976 390 ntBASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 FAR1P1-201ENST00000427163 934 ntBASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 GAPDHP59-201ENST00000435908 267 ntBASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 OR3D1P-201ENST00000438288 955 ntBASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 AL158053.1-201ENST00000441503 453 ntBASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 AL645936.1-201ENST00000441979 518 ntBASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 RPL12P30-201ENST00000488389 499 ntBASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 RN7SL568P-201ENST00000493069 298 ntBASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 RN7SL612P-201ENST00000497704 295 ntBASIC6.42□□□□□ -1.38
TCRBV5S1A1TA0A578 SNORA70.17-201ENST00000516449 133 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms