Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 AC004951.3-201ENST00000418645 1148 ntBASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 AC063952.2-201ENST00000498792 1227 ntBASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.75■■□□□ 1.07
SCN10AQ9Y5Y9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.75■■□□□ 1.07
SCN10AQ9Y5Y9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.75■■□□□ 1.07
SCN10AQ9Y5Y9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.75■■□□□ 1.07
SCN10AQ9Y5Y9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SCN10AQ9Y5Y9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCN10AQ9Y5Y9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCN10AQ9Y5Y9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCN10AQ9Y5Y9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SCN10AQ9Y5Y9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.75■■□□□ 1.07
SCN10AQ9Y5Y9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCN10AQ9Y5Y9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCN10AQ9Y5Y9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCN10AQ9Y5Y9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SCN10AQ9Y5Y9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 MFAP1P1-201ENST00000442257 1255 ntBASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 TMEM179-206ENST00000616017 1645 ntBASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 AC117947.1-201ENST00000427448 529 ntBASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 FAM207BP-201ENST00000447172 505 ntBASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 AC011298.2-201ENST00000617989 482 ntBASIC21.74■■□□□ 1.07
SCN10AQ9Y5Y9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SCN10AQ9Y5Y9 BX119927.1-201ENST00000636596 1552 ntBASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 AC007663.1-201ENST00000438948 1240 ntBASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 KRT8P8-201ENST00000434750 1448 ntBASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 SLC25A1P4-201ENST00000567977 778 ntBASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCN10AQ9Y5Y9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 ATP5G1P1-201ENST00000448724 379 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms