Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 POM121L13P-201ENST00000422362 380 ntBASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PCDHB1Q9Y5F3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 TMEM179-206ENST00000616017 1645 ntBASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB1Q9Y5F3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB1Q9Y5F3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 LINC01023-201ENST00000606054 436 ntBASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 AC010331.1-201ENST00000611423 582 ntBASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB1Q9Y5F3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms