Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 PHGDH-210ENST00000641115 1638 ntBASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 AC007375.3-201ENST00000600936 2314 ntBASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 YBX1P10-201ENST00000444752 975 ntBASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 AC116562.2-201ENST00000507042 360 ntBASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRG3Q9Y2Y8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
PRG3Q9Y2Y8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PRG3Q9Y2Y8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
PRG3Q9Y2Y8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRG3Q9Y2Y8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 TUBB8P6-201ENST00000436895 1288 ntBASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PRG3Q9Y2Y8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 KRT18P16-201ENST00000510337 1294 ntBASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 RN7SL850P-201ENST00000579959 291 ntBASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 AC145285.6-201ENST00000604632 637 ntBASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 AL031985.4-201ENST00000642138 673 ntBASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.12■□□□□ 0.97
PRG3Q9Y2Y8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms