Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.81■■□□□ 1.08
NOD1Q9Y239 AC097488.1-201ENST00000507834 756 ntBASIC21.81■■□□□ 1.08
NOD1Q9Y239 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NOD1Q9Y239 AC087388.1-201ENST00000571370 1112 ntBASIC21.81■■□□□ 1.08
NOD1Q9Y239 AP005242.2-201ENST00000580065 1175 ntBASIC21.81■■□□□ 1.08
NOD1Q9Y239 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NOD1Q9Y239 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
NOD1Q9Y239 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NOD1Q9Y239 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NOD1Q9Y239 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NOD1Q9Y239 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NOD1Q9Y239 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NOD1Q9Y239 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NOD1Q9Y239 TFP1-202ENST00000475455 1573 ntBASIC21.8■■□□□ 1.08
NOD1Q9Y239 AC018553.1-201ENST00000616682 1458 ntBASIC21.8■■□□□ 1.08
NOD1Q9Y239 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NOD1Q9Y239 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NOD1Q9Y239 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.8■■□□□ 1.08
NOD1Q9Y239 MESTP1-201ENST00000404287 994 ntBASIC21.8■■□□□ 1.08
NOD1Q9Y239 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NOD1Q9Y239 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.8■■□□□ 1.08
NOD1Q9Y239 NTF6B-201ENST00000591913 560 ntBASIC21.8■■□□□ 1.08
NOD1Q9Y239 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NOD1Q9Y239 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
NOD1Q9Y239 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.8■■□□□ 1.08
NOD1Q9Y239 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.8■■□□□ 1.08
NOD1Q9Y239 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NOD1Q9Y239 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NOD1Q9Y239 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.8■■□□□ 1.08
NOD1Q9Y239 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NOD1Q9Y239 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NOD1Q9Y239 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NOD1Q9Y239 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NOD1Q9Y239 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NOD1Q9Y239 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NOD1Q9Y239 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
NOD1Q9Y239 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NOD1Q9Y239 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NOD1Q9Y239 AC128688.1-201ENST00000487626 519 ntBASIC21.79■■□□□ 1.08
NOD1Q9Y239 EGLN1P1-201ENST00000531623 762 ntBASIC21.79■■□□□ 1.08
NOD1Q9Y239 AC010203.1-204ENST00000548782 407 ntBASIC21.79■■□□□ 1.08
NOD1Q9Y239 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NOD1Q9Y239 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.79■■□□□ 1.08
NOD1Q9Y239 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NOD1Q9Y239 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
NOD1Q9Y239 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NOD1Q9Y239 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NOD1Q9Y239 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
NOD1Q9Y239 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
NOD1Q9Y239 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.78■■□□□ 1.08
NOD1Q9Y239 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 AC104076.2-201ENST00000448912 469 ntBASIC21.78■■□□□ 1.08
NOD1Q9Y239 ECEL1P2-202ENST00000465689 757 ntBASIC21.78■■□□□ 1.08
NOD1Q9Y239 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 KRT18P16-201ENST00000510337 1294 ntBASIC21.78■■□□□ 1.08
NOD1Q9Y239 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NOD1Q9Y239 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
NOD1Q9Y239 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.78■■□□□ 1.08
NOD1Q9Y239 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 AF106564.1-201ENST00000607058 2553 ntBASIC21.78■■□□□ 1.08
NOD1Q9Y239 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
NOD1Q9Y239 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOD1Q9Y239 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NOD1Q9Y239 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NOD1Q9Y239 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.77■■□□□ 1.08
NOD1Q9Y239 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
NOD1Q9Y239 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NOD1Q9Y239 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NOD1Q9Y239 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NOD1Q9Y239 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NOD1Q9Y239 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.77■■□□□ 1.08
NOD1Q9Y239 AC004980.1-204ENST00000429707 299 ntBASIC21.77■■□□□ 1.08
NOD1Q9Y239 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.77■■□□□ 1.08
NOD1Q9Y239 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NOD1Q9Y239 AC011506.1-201ENST00000474329 610 ntBASIC21.77■■□□□ 1.08
NOD1Q9Y239 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
NOD1Q9Y239 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.77■■□□□ 1.08
NOD1Q9Y239 SLC25A1P4-201ENST00000567977 778 ntBASIC21.77■■□□□ 1.08
NOD1Q9Y239 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.77■■□□□ 1.08
NOD1Q9Y239 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.77■■□□□ 1.08
NOD1Q9Y239 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.77■■□□□ 1.08
NOD1Q9Y239 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.77■■□□□ 1.08
NOD1Q9Y239 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NOD1Q9Y239 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NOD1Q9Y239 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NOD1Q9Y239 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NOD1Q9Y239 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NOD1Q9Y239 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms