Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SATB2Q9UPW6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.3■□□□□ 0.68
SATB2Q9UPW6 AL355355.2-201ENST00000442321 338 ntBASIC19.3■□□□□ 0.68
SATB2Q9UPW6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 AL353708.3-201ENST00000610272 989 ntBASIC19.3■□□□□ 0.68
SATB2Q9UPW6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.3■□□□□ 0.68
SATB2Q9UPW6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 CD177P1-201ENST00000606252 935 ntBASIC19.29■□□□□ 0.68
SATB2Q9UPW6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SATB2Q9UPW6 HTR7P1-201ENST00000538670 1336 ntBASIC19.28■□□□□ 0.68
SATB2Q9UPW6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 TMPOP1-202ENST00000424642 1267 ntBASIC19.28■□□□□ 0.68
SATB2Q9UPW6 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 AF186192.3-201ENST00000583427 947 ntBASIC19.28■□□□□ 0.68
SATB2Q9UPW6 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.28■□□□□ 0.68
SATB2Q9UPW6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SATB2Q9UPW6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 RN7SL850P-201ENST00000579959 291 ntBASIC19.27■□□□□ 0.68
SATB2Q9UPW6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 AL445228.2-201ENST00000605589 952 ntBASIC19.27■□□□□ 0.68
SATB2Q9UPW6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SATB2Q9UPW6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
SATB2Q9UPW6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.27■□□□□ 0.67
SATB2Q9UPW6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SATB2Q9UPW6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms