Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 C11orf96-202ENST00000528572 1834 ntBASIC8.2□□□□□ -1.1
MACF1Q9UPN3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 TSPY17P-201ENST00000450329 467 ntBASIC8.19□□□□□ -1.1
MACF1Q9UPN3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC8.19□□□□□ -1.1
MACF1Q9UPN3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 AF238378.1-201ENST00000526806 358 ntBASIC8.19□□□□□ -1.1
MACF1Q9UPN3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 COA5-202ENST00000409997 557 ntTSL 4 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 AL645939.2-201ENST00000427340 991 ntBASIC8.19□□□□□ -1.1
MACF1Q9UPN3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 GAPDHP21-201ENST00000450301 1010 ntBASIC8.19□□□□□ -1.1
MACF1Q9UPN3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 MIR7706-201ENST00000613747 67 ntBASIC8.19□□□□□ -1.1
MACF1Q9UPN3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
MACF1Q9UPN3 SLC25A6P5-201ENST00000435663 894 ntBASIC8.18□□□□□ -1.1
MACF1Q9UPN3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 AC138894.3-201ENST00000603787 634 ntBASIC8.18□□□□□ -1.1
MACF1Q9UPN3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC8.18□□□□□ -1.1
MACF1Q9UPN3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC8.18□□□□□ -1.1
MACF1Q9UPN3 AC003102.1-202ENST00000563394 1796 ntBASIC8.18□□□□□ -1.1
MACF1Q9UPN3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms