Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 AP003097.1-201ENST00000530657 1135 ntBASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 AL158211.5-201ENST00000623583 2518 ntBASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
PCDHGC3Q9UN70 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 AC026366.1-201ENST00000488803 879 ntBASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHGC3Q9UN70 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC3Q9UN70 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGC3Q9UN70 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC3Q9UN70 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PCDHGC3Q9UN70 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGC3Q9UN70 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
PCDHGC3Q9UN70 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC3Q9UN70 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGC3Q9UN70 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PCDHGC3Q9UN70 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC3Q9UN70 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC3Q9UN70 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC3Q9UN70 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PCDHGC3Q9UN70 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms