Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 KRT18P57-201ENST00000443599 1254 ntBASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 AC018553.1-201ENST00000616682 1458 ntBASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNMT3BQ9UBC3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 FSCN1P1-201ENST00000568912 1481 ntBASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 TERF1P1-201ENST00000311003 1181 ntBASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 AL590326.2-201ENST00000625139 305 ntBASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 AL137060.1-201ENST00000618151 2648 ntBASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DNMT3BQ9UBC3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
DNMT3BQ9UBC3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.64■□□□□ 0.9
DNMT3BQ9UBC3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DNMT3BQ9UBC3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DNMT3BQ9UBC3 AC073508.3-201ENST00000619697 1419 ntBASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 AL137013.1-201ENST00000432946 1228 ntBASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 YBX1P10-201ENST00000444752 975 ntBASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 KRT18P16-201ENST00000510337 1294 ntBASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 AC092720.2-201ENST00000602388 1665 ntBASIC20.64■□□□□ 0.89
DNMT3BQ9UBC3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 SLC25A3P1-201ENST00000443844 931 ntBASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 AC011506.1-201ENST00000474329 610 ntBASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3BQ9UBC3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 AC004980.1-204ENST00000429707 299 ntBASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 B3GAT3P1-201ENST00000471720 806 ntBASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.62■□□□□ 0.89
DNMT3BQ9UBC3 AC026271.3-201ENST00000571884 352 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms