Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD7Q9P2D1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD7Q9P2D1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHD7Q9P2D1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD7Q9P2D1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.07■□□□□ 0.96
CHD7Q9P2D1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHD7Q9P2D1 GUSBP5-202ENST00000510805 1989 ntBASIC21.07■□□□□ 0.96
CHD7Q9P2D1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHD7Q9P2D1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD7Q9P2D1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD7Q9P2D1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.07■□□□□ 0.96
CHD7Q9P2D1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.07■□□□□ 0.96
CHD7Q9P2D1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD7Q9P2D1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD7Q9P2D1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD7Q9P2D1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 FDX1P1-201ENST00000449115 551 ntBASIC21.06■□□□□ 0.96
CHD7Q9P2D1 AL671277.2-201ENST00000458060 996 ntBASIC21.06■□□□□ 0.96
CHD7Q9P2D1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD7Q9P2D1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 MIR2861-201ENST00000636310 90 ntBASIC21.05■□□□□ 0.96
CHD7Q9P2D1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.05■□□□□ 0.96
CHD7Q9P2D1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 GPALPP1-207ENST00000611650 899 ntBASIC21.04■□□□□ 0.96
CHD7Q9P2D1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 HYMAI.1-201ENST00000620949 238 ntBASIC21.04■□□□□ 0.96
CHD7Q9P2D1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD7Q9P2D1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 AL441883.1-201ENST00000566170 1045 ntBASIC21.03■□□□□ 0.96
CHD7Q9P2D1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 AC012313.10-201ENST00000623509 926 ntBASIC21.03■□□□□ 0.96
CHD7Q9P2D1 AP006587.1-201ENST00000534129 1502 ntBASIC21.03■□□□□ 0.96
CHD7Q9P2D1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 AC233723.2-201ENST00000623798 2106 ntBASIC21.03■□□□□ 0.96
CHD7Q9P2D1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms